Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327B08f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 3.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 3.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 3.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 4.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 4.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 4.4
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 7.7
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 2.5
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 62 KYQLQHENYNNSN-AHTHSKYC*T*IQNIIS 151
KY + NYNN+N + ++ C NII+
Sbjct: 330 KYNYNNNNYNNNNYNNNYNNNCKKLYYNIIN 360
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 77 HENYNNSNAHTHSK 118
+ NYNN N H ++K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 8 RDDYENNN*K**VCVEQLKYQLQHENYNNSNAHTHSKYC*T*IQNIIS 151
RD E K + L ++ NYNN N + ++ Y NII+
Sbjct: 68 RDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 8 RDDYENNN*K**VCVEQLKYQLQHENYNNSNAHTHSKYC*T*IQNIIS 151
RD E K + L ++ NYNN N + ++ Y NII+
Sbjct: 68 RDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 8 RDDYENNN*K**VCVEQLKYQLQHENYNNSNAHTHSKYC*T*IQNIIS 151
RD E K + L ++ NYNN N + ++ Y NII+
Sbjct: 68 RDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 8 RDDYENNN*K**VCVEQLKYQLQHENYNNSNAHTHSKYC*T*IQNIIS 151
RD E K + L ++ NYNN N + ++ Y NII+
Sbjct: 68 RDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 8 RDDYENNN*K**VCVEQLKYQLQHENYNNSNAHTHSKYC*T*IQNIIS 151
RD E K + L ++ NYNN N + ++ Y NII+
Sbjct: 68 RDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 8 RDDYENNN*K**VCVEQLKYQLQHENYNNSNAHTHSKYC*T*IQNIIS 151
RD E K + L ++ NYNN N + ++ Y NII+
Sbjct: 68 RDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 8 RDDYENNN*K**VCVEQLKYQLQHENYNNSNAHTHSKYC*T*IQNIIS 151
RD E K + L ++ NYNN N + ++ Y NII+
Sbjct: 68 RDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 77 HENYNNSNAHTHSK 118
+ NYNN N H ++K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 77 HENYNNSNAHTHSK 118
+ NYNN N H ++K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 77 HENYNNSNAHTHSK 118
+ NYNN N H ++K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 77 HENYNNSNAHTHSK 118
+ NYNN N H ++K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 77 HENYNNSNAHTHSK 118
+ NYNN N H ++K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 77 HENYNNSNAHTHSK 118
+ NYNN N H ++K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 77 HENYNNSNAHTHSK 118
+ NYNN N H ++K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 77 HENYNNSNAHTHSK 118
+ NYNN N H ++K
Sbjct: 95 NNNYNNYNKHNYNK 108
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 77 HENYNNSNAHTHSK 118
+ NYNN N H ++K
Sbjct: 328 NNNYNNYNKHNYNK 341
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 77 HENYNNSNAHTHSK 118
+ NYNN N H ++K
Sbjct: 328 NNNYNNYNKHNYNK 341
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 62 KYQLQHENYNNSN 100
KY + NYNN+N
Sbjct: 95 KYNYNNNNYNNNN 107
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 62 KYQLQHENYNNSN 100
KY + NYNN+N
Sbjct: 95 KYNYNNNNYNNNN 107
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 65 YQLQHENYNNSNAHTHSK 118
Y + NYNN+N + + K
Sbjct: 334 YNNNYNNYNNNNYNNYKK 351
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 329 HQKVFRLHVRKKKK 370
HQK R H+ K++K
Sbjct: 356 HQKKLRFHLAKERK 369
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,362
Number of Sequences: 438
Number of extensions: 2617
Number of successful extensions: 26
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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