SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327B07f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001883-1|AAN71657.1|  155|Drosophila melanogaster SD13983p pro...   146   1e-35
AE014297-765|AAF54251.3|  155|Drosophila melanogaster CG31450-PA...   146   1e-35
BT029424-1|ABK57081.1|  140|Drosophila melanogaster IP02768p pro...    44   1e-04
BT023241-1|AAY55657.1|  140|Drosophila melanogaster IP02765p pro...    44   1e-04
AE014297-4588|AAF57041.2|  140|Drosophila melanogaster CG9688-PA...    44   1e-04
AY268061-1|AAP50844.1|  545|Drosophila melanogaster peptide rece...    33   0.23 
AY128481-1|AAM75074.1|  545|Drosophila melanogaster RE56254p pro...    32   0.41 
AE014298-675|AAX52478.1|  545|Drosophila melanogaster CG6986-PD,...    32   0.41 
AE014298-674|AAX52477.1|  545|Drosophila melanogaster CG6986-PC,...    32   0.41 
AE014298-673|AAN09130.1|  545|Drosophila melanogaster CG6986-PB,...    32   0.41 
AE014298-672|AAF45980.2|  545|Drosophila melanogaster CG6986-PA,...    32   0.41 
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr...    29   2.9  
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA...    29   2.9  
L02111-1|AAA28405.1|  865|Drosophila melanogaster calcium-bindin...    29   5.1  
AY058315-1|AAL13544.1|  864|Drosophila melanogaster GH08002p pro...    29   5.1  
AE014297-1457|AAF54754.1|  864|Drosophila melanogaster CG4795-PB...    29   5.1  
AE014297-1456|AAF54755.1|  842|Drosophila melanogaster CG4795-PA...    29   5.1  
L05080-1|AAA28420.1|  873|Drosophila melanogaster calphotin prot...    28   6.7  
BT025101-1|ABE73272.1|  392|Drosophila melanogaster IP11357p pro...    28   6.7  
AE014134-956|AAF52279.1|  392|Drosophila melanogaster CG7236-PA ...    28   6.7  
BT001679-1|AAN71434.1|  699|Drosophila melanogaster RE55836p pro...    28   8.8  
AY118712-1|AAM50572.1| 1266|Drosophila melanogaster AT25667p pro...    28   8.8  
AY069675-1|AAL39820.1|  700|Drosophila melanogaster LD44979p pro...    28   8.8  
AE014297-3690|AAN14031.1|  699|Drosophila melanogaster CG6422-PB...    28   8.8  
AE014297-3689|AAF56381.1|  700|Drosophila melanogaster CG6422-PA...    28   8.8  

>BT001883-1|AAN71657.1|  155|Drosophila melanogaster SD13983p
           protein.
          Length = 155

 Score =  146 bits (355), Expect = 1e-35
 Identities = 80/152 (52%), Positives = 99/152 (65%)
 Frame = +1

Query: 28  RVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDLSLTKLPS 207
           R ++TT    IKEI E+ E +  + EGV + SPR  L+++               TK   
Sbjct: 20  RGVATTMPRQIKEIHEKQENSVKIFEGVNVESPRAHLMLK-----------SACQTKF-- 66

Query: 208 SEKPPCYMCALGLDVKHTDVLILSQFVRSDGCMLPKRITGLCKRQQKKIGKMVSMAQKAG 387
                C  C LGLD+KHTDVLILSQ+VRSDGCMLP+RITGLC RQQKK+G +V+MAQKAG
Sbjct: 67  -----CPECTLGLDIKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAG 121

Query: 388 LMINLTPSNSXKDPTKRKEYKKFNTYFDETTI 483
           LM NL P  S +DP KR  ++KFN YF E+TI
Sbjct: 122 LMPNLAPEWSKRDPKKRFGWRKFNKYFLESTI 153


>AE014297-765|AAF54251.3|  155|Drosophila melanogaster CG31450-PA
           protein.
          Length = 155

 Score =  146 bits (355), Expect = 1e-35
 Identities = 80/152 (52%), Positives = 99/152 (65%)
 Frame = +1

Query: 28  RVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDLSLTKLPS 207
           R ++TT    IKEI E+ E +  + EGV + SPR  L+++               TK   
Sbjct: 20  RGVATTMPRQIKEIHEKQENSVKIFEGVNVESPRAHLMLK-----------SACQTKF-- 66

Query: 208 SEKPPCYMCALGLDVKHTDVLILSQFVRSDGCMLPKRITGLCKRQQKKIGKMVSMAQKAG 387
                C  C LGLD+KHTDVLILSQ+VRSDGCMLP+RITGLC RQQKK+G +V+MAQKAG
Sbjct: 67  -----CPECTLGLDIKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAG 121

Query: 388 LMINLTPSNSXKDPTKRKEYKKFNTYFDETTI 483
           LM NL P  S +DP KR  ++KFN YF E+TI
Sbjct: 122 LMPNLAPEWSKRDPKKRFGWRKFNKYFLESTI 153


>BT029424-1|ABK57081.1|  140|Drosophila melanogaster IP02768p
           protein.
          Length = 140

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
 Frame = +1

Query: 154 NVTPPLPNIDLSLTKLPSSEKPP--CYMCALGLDVKHTDVLILSQFVRS-DGCMLPKRIT 324
           +  P   ++DL +      EK P  C +C   ++  + +V +LSQF     G +  + IT
Sbjct: 31  SAAPESSDLDLPIDIKNPYEKDPQQCILCKHSIEPHYKNVKLLSQFQSPYTGRIYGRHIT 90

Query: 325 GLCKRQQKKIGKMVSMAQKAGLM 393
           GLCKR+Q+++ + +  AQ+  LM
Sbjct: 91  GLCKRRQEQVEQAILRAQQCLLM 113


>BT023241-1|AAY55657.1|  140|Drosophila melanogaster IP02765p
           protein.
          Length = 140

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
 Frame = +1

Query: 154 NVTPPLPNIDLSLTKLPSSEKPP--CYMCALGLDVKHTDVLILSQFVRS-DGCMLPKRIT 324
           +  P   ++DL +      EK P  C +C   ++  + +V +LSQF     G +  + IT
Sbjct: 31  SAAPESSDLDLPIDIKNPYEKDPQQCILCKHSIEPHYKNVKLLSQFQSPYTGRIYGRHIT 90

Query: 325 GLCKRQQKKIGKMVSMAQKAGLM 393
           GLCKR+Q+++ + +  AQ+  LM
Sbjct: 91  GLCKRRQEQVEQAILRAQQCLLM 113


>AE014297-4588|AAF57041.2|  140|Drosophila melanogaster CG9688-PA
           protein.
          Length = 140

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
 Frame = +1

Query: 154 NVTPPLPNIDLSLTKLPSSEKPP--CYMCALGLDVKHTDVLILSQFVRS-DGCMLPKRIT 324
           +  P   ++DL +      EK P  C +C   ++  + +V +LSQF     G +  + IT
Sbjct: 31  SAAPESSDLDLPIDIKNPYEKDPQQCILCKHSIEPHYKNVKLLSQFQSPYTGRIYGRHIT 90

Query: 325 GLCKRQQKKIGKMVSMAQKAGLM 393
           GLCKR+Q+++ + +  AQ+  LM
Sbjct: 91  GLCKRRQEQVEQAILRAQQCLLM 113


>AY268061-1|AAP50844.1|  545|Drosophila melanogaster peptide
           receptor GPCR protein.
          Length = 545

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 10  ILSTTTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLP 174
           +LST +     T  +  ++I +  +  N  +  ++ P P + + V PP  TPPLP
Sbjct: 170 LLSTLSTAFEHTITIGTRQIDDAYQPCNQTVANIS-PMPPSPVAVTPPLATPPLP 223


>AY128481-1|AAM75074.1|  545|Drosophila melanogaster RE56254p
           protein.
          Length = 545

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 10  ILSTTTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLP 174
           +LST +     T  +  ++I +  +  N  +  ++ P P   + V PP  TPPLP
Sbjct: 170 LLSTLSTAFEHTITIGTRQIDDAYQPCNQTVANIS-PMPPPPVAVTPPLATPPLP 223


>AE014298-675|AAX52478.1|  545|Drosophila melanogaster CG6986-PD,
           isoform D protein.
          Length = 545

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 10  ILSTTTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLP 174
           +LST +     T  +  ++I +  +  N  +  ++ P P   + V PP  TPPLP
Sbjct: 170 LLSTLSTAFEHTITIGTRQIDDAYQPCNQTVANIS-PMPPPPVAVTPPLATPPLP 223


>AE014298-674|AAX52477.1|  545|Drosophila melanogaster CG6986-PC,
           isoform C protein.
          Length = 545

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 10  ILSTTTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLP 174
           +LST +     T  +  ++I +  +  N  +  ++ P P   + V PP  TPPLP
Sbjct: 170 LLSTLSTAFEHTITIGTRQIDDAYQPCNQTVANIS-PMPPPPVAVTPPLATPPLP 223


>AE014298-673|AAN09130.1|  545|Drosophila melanogaster CG6986-PB,
           isoform B protein.
          Length = 545

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 10  ILSTTTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLP 174
           +LST +     T  +  ++I +  +  N  +  ++ P P   + V PP  TPPLP
Sbjct: 170 LLSTLSTAFEHTITIGTRQIDDAYQPCNQTVANIS-PMPPPPVAVTPPLATPPLP 223


>AE014298-672|AAF45980.2|  545|Drosophila melanogaster CG6986-PA,
           isoform A protein.
          Length = 545

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 10  ILSTTTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLP 174
           +LST +     T  +  ++I +  +  N  +  ++ P P   + V PP  TPPLP
Sbjct: 170 LLSTLSTAFEHTITIGTRQIDDAYQPCNQTVANIS-PMPPPPVAVTPPLATPPLP 223


>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
           protein.
          Length = 1795

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +1

Query: 19  TTTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDLSLTK 198
           TTT+V +TT       +R  TE T+      T P P T   +    VTP       +  K
Sbjct: 720 TTTKVTTTTQITTTTPLRSSTETTSTQPPTTTTPQPTTTTTL---TVTPKTSTTTTTTEK 776

Query: 199 -LPSSEKP 219
            + SS KP
Sbjct: 777 PITSSPKP 784



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
 Frame = +1

Query: 10  ILSTTTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTP--PLPNID 183
           +++TTT+  STT      + +     T L  +  T PS  T     P   TP    P+  
Sbjct: 536 VVTTTTQKRSTTTHNTSPDTKTTIRSTTLSPKTTTTPSTTTPSTTTPSTTTPSTTTPSTT 595

Query: 184 LSLTKLPSS 210
              T  PS+
Sbjct: 596 TPSTTTPST 604


>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
           protein.
          Length = 1795

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +1

Query: 19  TTTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDLSLTK 198
           TTT+V +TT       +R  TE T+      T P P T   +    VTP       +  K
Sbjct: 720 TTTKVTTTTQITTTTPLRSSTETTSTQPPTTTTPQPTTTTTL---TVTPKTSTTTTTTEK 776

Query: 199 -LPSSEKP 219
            + SS KP
Sbjct: 777 PITSSPKP 784



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
 Frame = +1

Query: 10  ILSTTTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTP--PLPNID 183
           +++TTT+  STT      + +     T L  +  T PS  T     P   TP    P+  
Sbjct: 536 VVTTTTQKRSTTTHNTSPDTKTTIRSTTLSPKTTTTPSTTTPSTTTPSTTTPSTTTPSTT 595

Query: 184 LSLTKLPSS 210
              T  PS+
Sbjct: 596 TPSTTTPST 604


>L02111-1|AAA28405.1|  865|Drosophila melanogaster calcium-binding
           protein protein.
          Length = 865

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +1

Query: 34  ISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDLSLTKLPSSE 213
           +  T ++ + ++       +L+IE V  P+P  +LL +  +V P +   + + + +P + 
Sbjct: 516 VEVTTEVAVADVAPPEAAADLIIEPVEPPAPIPDLLEQTTSV-PAVEAAESTSSPIPETS 574

Query: 214 KPP 222
            PP
Sbjct: 575 LPP 577


>AY058315-1|AAL13544.1|  864|Drosophila melanogaster GH08002p
           protein.
          Length = 864

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +1

Query: 34  ISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDLSLTKLPSSE 213
           +  T ++ + ++       +L+IE V  P+P  +LL +  +V P +   + + + +P + 
Sbjct: 517 VEVTTEVAVADVAPPEAAADLIIEPVEPPAPIPDLLEQTTSV-PAVEAAESTSSPIPETS 575

Query: 214 KPP 222
            PP
Sbjct: 576 LPP 578


>AE014297-1457|AAF54754.1|  864|Drosophila melanogaster CG4795-PB,
           isoform B protein.
          Length = 864

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +1

Query: 34  ISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDLSLTKLPSSE 213
           +  T ++ + ++       +L+IE V  P+P  +LL +  +V P +   + + + +P + 
Sbjct: 517 VEVTTEVAVADVAPPEAAADLIIEPVEPPAPIPDLLEQTTSV-PAVEAAESTSSPIPETS 575

Query: 214 KPP 222
            PP
Sbjct: 576 LPP 578


>AE014297-1456|AAF54755.1|  842|Drosophila melanogaster CG4795-PA,
           isoform A protein.
          Length = 842

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +1

Query: 34  ISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDLSLTKLPSSE 213
           +  T ++ + ++       +L+IE V  P+P  +LL +  +V P +   + + + +P + 
Sbjct: 517 VEVTTEVAVADVAPPEAAADLIIEPVEPPAPIPDLLEQTTSV-PAVEAAESTSSPIPETS 575

Query: 214 KPP 222
            PP
Sbjct: 576 LPP 578


>L05080-1|AAA28420.1|  873|Drosophila melanogaster calphotin
           protein.
          Length = 873

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +1

Query: 34  ISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDLSLTKLPSSE 213
           +  T ++ + ++       +L+IE V  P+P  +LL +  +V P +   + + + +P + 
Sbjct: 524 VEVTTEVAVADVAPPEAAEDLIIEPVEPPAPIPDLLEQTTSV-PAVEAAESTSSPIPETS 582

Query: 214 KPP 222
            PP
Sbjct: 583 LPP 585


>BT025101-1|ABE73272.1|  392|Drosophila melanogaster IP11357p
           protein.
          Length = 392

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +1

Query: 358 KMVSMAQKAGLMINLTPSNSXKDPTKRKEYKKF--NTYFDETTIFKKRE 498
           KM + +Q+  L I+       KDPTKR   +K   ++YFD+  I K+RE
Sbjct: 251 KMPAKSQQNPLTIDFLKKCLDKDPTKRWSCEKLTKHSYFDD-YIAKQRE 298


>AE014134-956|AAF52279.1|  392|Drosophila melanogaster CG7236-PA
           protein.
          Length = 392

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +1

Query: 358 KMVSMAQKAGLMINLTPSNSXKDPTKRKEYKKF--NTYFDETTIFKKRE 498
           KM + +Q+  L I+       KDPTKR   +K   ++YFD+  I K+RE
Sbjct: 251 KMPAKSQQNPLTIDFLKKCLDKDPTKRWSCEKLTKHSYFDD-YIAKQRE 298


>BT001679-1|AAN71434.1|  699|Drosophila melanogaster RE55836p
           protein.
          Length = 699

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +1

Query: 148 PPNVTPPLPNIDLSLTKLPSSEKPPCYMCALGLDVKHTDV 267
           PP + P   N+D+++  LP+++ PP       +D+ ++D+
Sbjct: 177 PPPMVPGKHNLDVNVWDLPNNKPPPVPSPPSPIDLGYSDL 216


>AY118712-1|AAM50572.1| 1266|Drosophila melanogaster AT25667p
           protein.
          Length = 1266

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +1

Query: 28  RVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDLSLTKLPS 207
           R  S+   ++ K+ ++    T+  +E  T P P+      PP    P P  ++S++ LPS
Sbjct: 515 RASSSLKMVSQKDFKQSDAATS--VESHTAPVPKASSQTSPP----PSPVKEISMSALPS 568

Query: 208 SEKP 219
            + P
Sbjct: 569 PKDP 572


>AY069675-1|AAL39820.1|  700|Drosophila melanogaster LD44979p
           protein.
          Length = 700

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +1

Query: 148 PPNVTPPLPNIDLSLTKLPSSEKPPCYMCALGLDVKHTDV 267
           PP + P   N+D+++  LP+++ PP       +D+ ++D+
Sbjct: 178 PPPMVPGKHNLDVNVWDLPNNKPPPVPSPPSPIDLGYSDL 217


>AE014297-3690|AAN14031.1|  699|Drosophila melanogaster CG6422-PB,
           isoform B protein.
          Length = 699

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +1

Query: 148 PPNVTPPLPNIDLSLTKLPSSEKPPCYMCALGLDVKHTDV 267
           PP + P   N+D+++  LP+++ PP       +D+ ++D+
Sbjct: 177 PPPMVPGKHNLDVNVWDLPNNKPPPVPSPPSPIDLGYSDL 216


>AE014297-3689|AAF56381.1|  700|Drosophila melanogaster CG6422-PA,
           isoform A protein.
          Length = 700

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +1

Query: 148 PPNVTPPLPNIDLSLTKLPSSEKPPCYMCALGLDVKHTDV 267
           PP + P   N+D+++  LP+++ PP       +D+ ++D+
Sbjct: 178 PPPMVPGKHNLDVNVWDLPNNKPPPVPSPPSPIDLGYSDL 217


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.315    0.133    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,490,378
Number of Sequences: 53049
Number of extensions: 517380
Number of successful extensions: 1954
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1946
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

- SilkBase 1999-2023 -