Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327B04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 233 7e-62
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 233 7e-62
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 91 6e-19
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 91 6e-19
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 88 4e-18
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 82 2e-16
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 77 1e-14
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 77 1e-14
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 73 9e-14
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 69 2e-12
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 68 5e-12
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 67 6e-12
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 65 3e-11
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 64 4e-11
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 61 5e-10
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 60 7e-10
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 57 7e-09
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 55 4e-08
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 54 8e-08
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 49 2e-06
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 48 3e-06
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 39 0.002
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical p... 27 8.1
Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 27 8.1
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 233 bits (569), Expect = 7e-62
Identities = 97/121 (80%), Positives = 112/121 (92%)
Frame = +3
Query: 159 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 338
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+LNL WECAIPG+K T WEGGLY++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 339 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILXGIQDLL 518
RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLSLLDE KDW+P+I+IKQ+L GIQDLL
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLL 120
Query: 519 N 521
N
Sbjct: 121 N 121
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 233 bits (569), Expect = 7e-62
Identities = 97/121 (80%), Positives = 112/121 (92%)
Frame = +3
Query: 159 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 338
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+LNL WECAIPG+K T WEGGLY++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 339 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILXGIQDLL 518
RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLSLLDE KDW+P+I+IKQ+L GIQDLL
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLL 120
Query: 519 N 521
N
Sbjct: 121 N 121
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 90.6 bits (215), Expect = 6e-19
Identities = 44/114 (38%), Positives = 65/114 (57%)
Frame = +3
Query: 180 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 359
RL + K ++D P G P ++ N++TWE I G + TP+E G +KL + F ++
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTED-----NILTWEAIIFGPQETPFEDGTFKLSLEFTEE 62
Query: 360 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILXGIQDLLN 521
YP+ PP KF +FHPNVY G++CL +L + W P + IL IQ LL+
Sbjct: 63 YPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAAILTSIQSLLD 114
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 90.6 bits (215), Expect = 6e-19
Identities = 44/114 (38%), Positives = 65/114 (57%)
Frame = +3
Query: 180 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 359
RL + K ++D P G P ++ N++TWE I G + TP+E G +KL + F ++
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTED-----NILTWEAIIFGPQETPFEDGTFKLSLEFTEE 62
Query: 360 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILXGIQDLLN 521
YP+ PP KF +FHPNVY G++CL +L + W P + IL IQ LL+
Sbjct: 63 YPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAAILTSIQSLLD 114
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 87.8 bits (208), Expect = 4e-18
Identities = 41/110 (37%), Positives = 68/110 (61%)
Frame = +3
Query: 189 EERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPS 368
EE+ W + P G+ A+P+ +G+ +W C +PG +G+PWEGG Y++ + F +P
Sbjct: 42 EEKAKWDERTPQGYTAKPISF-EGADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WPI 99
Query: 369 SPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILXGIQDLL 518
PP C+F+ PL HPNV G++ L +L++E W ++K++L I +LL
Sbjct: 100 IPPICEFKTPLHHPNVDLRGSIYLKMLEQE-HWSSETSLKKLLREISNLL 148
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 82.2 bits (194), Expect = 2e-16
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Frame = +3
Query: 159 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 338
M+G A RL E K P G +A P+ N WEC I G + T + G++
Sbjct: 1 MAGYALKRLMTEYKELTTRPPEGIIAAPIDED----NFFEWECLITGPEETCFANGVFPA 56
Query: 339 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-----------WRPAITI 485
R+ F DYP SPPK +F +FHPN+Y G VC+S+L D W P +I
Sbjct: 57 RITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSI 116
Query: 486 KQILXGIQDLL 518
++IL + +L
Sbjct: 117 EKILLSVVSML 127
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 76.6 bits (180), Expect = 1e-14
Identities = 39/117 (33%), Positives = 64/117 (54%)
Frame = +3
Query: 168 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 347
+A R+ +E + +D P A P+ + +L W+ I G +P++GG++ L +
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGD-----DLFHWQATIMGPPESPYQGGVFFLTIH 55
Query: 348 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILXGIQDLL 518
F DYP PPK F ++HPN+ +G++CL +L W PA+TI ++L I LL
Sbjct: 56 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RSQWSPALTISKVLLSICSLL 110
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 76.6 bits (180), Expect = 1e-14
Identities = 39/117 (33%), Positives = 64/117 (54%)
Frame = +3
Query: 168 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 347
+A R+ +E + +D P A P+ + +L W+ I G +P++GG++ L +
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGD-----DLFHWQATIMGPPESPYQGGVFFLTIH 55
Query: 348 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILXGIQDLL 518
F DYP PPK F ++HPN+ +G++CL +L W PA+TI ++L I LL
Sbjct: 56 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RSQWSPALTISKVLLSICSLL 110
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 73.3 bits (172), Expect = 9e-14
Identities = 40/121 (33%), Positives = 65/121 (53%)
Frame = +3
Query: 159 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 338
M+G R+ +E + D G A NPD S N + I G +P+ GG++KL
Sbjct: 1 MAGQLPRRIIKETQRLLADPVPGISA----NPDES-NARYFHVMIAGPDDSPFAGGVFKL 55
Query: 339 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILXGIQDLL 518
+ ++YP + PK +F ++HPN+ G +CL +L ++ W PA+ I+ +L IQ LL
Sbjct: 56 ELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDK--WSPALQIRTVLLSIQALL 113
Query: 519 N 521
+
Sbjct: 114 S 114
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 68.9 bits (161), Expect = 2e-12
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Frame = +3
Query: 159 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 338
MS A+ RL +E + + P G + + N S +L W+ + G +GT + G ++ L
Sbjct: 1 MSDAATRRLMKELAQLKSEAPEGLL---VDNTSTSNDLKQWKIGVVGAEGTLYAGEVFML 57
Query: 339 RMIFKDDYPSSPPKCKF--EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILXGIQD 512
+ F YP + P+ F E HP++Y +G +CLS+L + DW PA++++ + I
Sbjct: 58 QFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSD--DWTPALSVQSVCLSILS 115
Query: 513 LLN 521
+L+
Sbjct: 116 MLS 118
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 67.7 bits (158), Expect = 5e-12
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Frame = +3
Query: 267 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 446
NL W I G T ++GG +K + F +YP SPP KF ++HPNVY +G +C+S+
Sbjct: 38 NLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISI 97
Query: 447 LDEEKD-----------WRPAITIKQILXGIQDLLN 521
L D W P +++ IL + LLN
Sbjct: 98 LHSPIDDPQSGELACERWNPTQSVRTILLSVISLLN 133
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 67.3 bits (157), Expect = 6e-12
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 NLMTWECA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 443
NL+ W IP K+ P+ G +K+ + F DYP PPK FE ++HPNV G CL
Sbjct: 31 NLLKWTVLLIPDKE--PYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLP 88
Query: 444 LLDEEKDWRPAITIKQILXGIQDLLN 521
++ E +W+PA +Q++ + L+N
Sbjct: 89 IVTAE-NWKPATKTEQVMMALLSLIN 113
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 64.9 bits (151), Expect = 3e-11
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Frame = +3
Query: 267 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 446
++ WE + G T +EGG +K + F DYP PPK KF ++HPN+ G VC+S+
Sbjct: 32 DIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISI 91
Query: 447 LDE-----------EKDWRPAITIKQILXGIQDLL 518
L + E+ W P T++ IL + +L
Sbjct: 92 LHDPGDDKWGYERPEERWLPVHTVETILLSVISML 126
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 64.5 bits (150), Expect = 4e-11
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 267 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 443
NL + I G TP+ GG++ L + D YP SPP KF ++HPNV +G +CL
Sbjct: 35 NLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLD 94
Query: 444 LLDEEKDWRPAITIKQILXGIQDLL 518
+L ++ W ++T++ +L IQ L+
Sbjct: 95 ILKDQ--WAASLTLRTVLLSIQALM 117
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 60.9 bits (141), Expect = 5e-10
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Frame = +3
Query: 291 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLD- 452
I G TP+ GL++ + F YP SPPKC F F+PN+Y G +CLS+L
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 453 ----EEKDWRPAITIKQILXGIQDLL 518
E+ W P ++ Q+L IQ+++
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSIQEVI 534
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 60.5 bits (140), Expect = 7e-10
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Frame = +3
Query: 162 SGIASARLAEERKAWRK--DHPFGFV-ARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLY 332
SG+++ L +K +++ P F+ A P++ N++ W I G TP+EGG+Y
Sbjct: 3 SGVSTVALQRLKKDYQRLLKEPVPFMKAAPLET-----NILEWRYIIIGAPKTPYEGGIY 57
Query: 333 KLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-WRPAITIKQILXGIQ 509
+++F D+P PP P + + +CLS+ D D W PA T+ I+ G+
Sbjct: 58 MGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLM 115
Query: 510 DLLN 521
+N
Sbjct: 116 SFMN 119
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 57.2 bits (132), Expect = 7e-09
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Frame = +3
Query: 162 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLR 341
S A RL ++ +D G A P N D N++ W + G TP+ GG Y +
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALP--NED---NILEWHYCLRGSPDTPFYGGYYWGK 71
Query: 342 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILXGIQDLL 518
+IFK+++P SPP P + + +CLS+ D + W P T+ IL G+ +
Sbjct: 72 VIFKENFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHSFM 129
Query: 519 N 521
N
Sbjct: 130 N 130
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 54.8 bits (126), Expect = 4e-08
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 291 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDW 467
I G + TP+EGG+++L + + YP P KF ++HP+V P GT+CL +D W
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGV-W 443
Query: 468 RPAITIKQILXGIQDLLN 521
++TI ++L IQ ++
Sbjct: 444 PVSMTIYKVLIVIQSWMS 461
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 53.6 bits (123), Expect = 8e-08
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Frame = +3
Query: 267 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK---------------CKFEPPL 401
NLM + I G +GTP+ GG +++++ + YP PPK KF +
Sbjct: 49 NLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRI 108
Query: 402 FHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILXGIQDLL 518
+HPN+ +GT+CL +L ++ W ++T++ +L +Q +L
Sbjct: 109 WHPNISSQTGTICLDILKDK--WTASLTLRTVLLSLQAML 146
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 297 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDE 455
G K T +E G++++R+ D YP P F +FHPN+ SGTVCL ++++
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQ 94
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 48.4 bits (110), Expect = 3e-06
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 267 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 446
NL W I G GT +EGG+Y R+IF DYP PP P + + VCLS+
Sbjct: 37 NLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSI 94
Query: 447 LD-EEKDWRPAITIKQILXGI 506
+ W P+ +I+ L +
Sbjct: 95 SGYHPETWLPSWSIRTALLAL 115
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 48.0 bits (109), Expect = 4e-06
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +3
Query: 315 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD----EEKDWRPAIT 482
+ GG ++ ++ +Y + PP K ++HPN+ G++CLS+L ++ WRP
Sbjct: 72 YRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRN 131
Query: 483 IKQILXGIQDLLN 521
+ ++ G+ L N
Sbjct: 132 LTDVVHGLVSLFN 144
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = +3
Query: 180 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 359
RL EE + +K G ++ +++ D + L W +I G TP+E +Y L++ +
Sbjct: 9 RLLEELEEGQKGKGDGNISWGLED-DSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGN 67
Query: 360 YPSSPPKCKFEPPLFHPNVYPS-GTVCLSLLDEEKDWRPAITIKQILXGIQ 509
YP PP +F + V S G + L ++W + IK +L I+
Sbjct: 68 YPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLRNWSNSYMIKTVLEDIR 118
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 44.0 bits (99), Expect = 7e-05
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 306 GTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAIT 482
G ++ ++ L + +YP PP KF ++HPNV P + +C +L +E +W+P T
Sbjct: 54 GVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQE-NWKPETT 112
Query: 483 IKQILXGIQDLLN 521
++ +L + LLN
Sbjct: 113 MEDVLLNLIVLLN 125
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +3
Query: 291 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPS 425
I G TP+E G++++ + F D+YP++ P+ KF+ +++ V PS
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPS 79
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 273 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSP 374
+TW+ IPGK T W+ K++ +++DD + P
Sbjct: 1394 VTWKTKIPGKLLTAWK----KIKEMYRDDKITVP 1423
>Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 349 SKMIIHQVLQNANLNHHCSTPMCIHQVRCACHCLMKKKIGVQQS 480
SK II ++ A+ H S+ IH+ A +CL+ K++ V+ S
Sbjct: 275 SKQIIKFAMEIASGMKHLSSKNVIHRDLAARNCLITKELNVKIS 318
>Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 349 SKMIIHQVLQNANLNHHCSTPMCIHQVRCACHCLMKKKIGVQQS 480
SK II ++ A+ H S+ IH+ A +CL+ K++ V+ S
Sbjct: 275 SKQIIKFAMEIASGMKHLSSKNVIHRDLAARNCLITKELNVKIS 318
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 273 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSP 374
+TW+ IPGK T W+ K++ +++DD + P
Sbjct: 1394 VTWKTKIPGKLLTAWK----KIKEMYRDDKITVP 1423
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,016,518
Number of Sequences: 27780
Number of extensions: 276676
Number of successful extensions: 720
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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