Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327B01f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 40 0.001
01_07_0176 - 41733845-41734834,41736058-41736588 30 0.002
06_02_0131 + 12161268-12161781,12162123-12162867,12162950-121629... 33 0.18
08_01_0801 - 7750548-7751708 32 0.32
06_03_1104 + 27623632-27623795,27624052-27624175,27624316-276248... 32 0.32
02_04_0471 + 23192001-23192102,23192229-23192356,23192440-231931... 32 0.32
08_01_0811 - 7872886-7873261,7873446-7873861,7874253-7874262,787... 31 0.42
08_01_0794 - 7687480-7687798,7687817-7688523 31 0.74
04_04_1221 + 31845938-31847038 30 0.98
08_01_0799 + 7734031-7735102,7735453-7735475 29 1.7
08_01_0199 + 1628158-1629192 29 2.3
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 29 3.0
03_05_0605 - 26066394-26066776,26067466-26067497,26069075-260693... 28 4.0
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 27 6.9
09_04_0093 - 14550806-14552452 27 9.1
>05_03_0604 -
16132173-16132391,16132488-16132556,16132824-16132898,
16132981-16133113,16133188-16133297,16133360-16133407,
16133657-16133983,16135006-16135233,16135360-16135689,
16135780-16136586
Length = 781
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 79 QNGEFVD--MTLASDGRFVKVHQVLLALASPYLKDLIASAPCPHPIIFLNNVSHHTLCLL 252
+N +F D + S+ + V H+V+L + +L+ S P I L +VS+ L L
Sbjct: 204 ENWDFSDSIFVVGSERKVVPAHKVVLGSCGDFPFNLMMSRPA----IELPSVSYPVLHSL 259
Query: 253 LEYIYTGEVIVAGDYLQQFIEAAKSLHIKGL 345
LEYIYTG ++ L +E + +K L
Sbjct: 260 LEYIYTGSTQISEWQLVSLLELSSQFKVKPL 290
>01_07_0176 - 41733845-41734834,41736058-41736588
Length = 506
Score = 30.3 bits (65), Expect(2) = 0.002
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +1
Query: 184 ASAPCPHPIIFLNNVSHHTLCLLLEYIYTGEV 279
A+A P +I +++VS+ LLL+++Y+G+V
Sbjct: 96 AAAATPGAVIPVSSVSYEVFLLLLQFLYSGQV 127
Score = 28.3 bits (60), Expect(2) = 0.002
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 49 SICDGFSTLQQNGE-FVDMTLASDGRFVKVHQVLLALASPYLKDLIASA 192
S+ + L NG+ F D+T + +GR V H+ +LA S + + A
Sbjct: 7 SLSMDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGA 55
>06_02_0131 +
12161268-12161781,12162123-12162867,12162950-12162986,
12163083-12163216,12163298-12163625
Length = 585
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = +1
Query: 97 DMTLASDGRFVKVHQVLLALASPYLKDLIASAPCPHPIIFLNN--VSHHTLCLLLEYIYT 270
D+T DG+ ++ H+V+L S + + + + ++ +S L L+ + Y+
Sbjct: 188 DITFYVDGKPIEAHRVILCARSSFFRRKFNTDWKDRKEVRFSSQKLSFGALYSLVHFFYS 247
Query: 271 GEVIVAGDYLQQFIEAAKSLHIKGLQNIIPNDFENNEEFYQEHDADETPDRKVTKASSHS 450
+ V D ++ A K +GLQ I+ E + Y EH + D + H
Sbjct: 248 DRLEVDVDDMENLARACKVCKCEGLQKILIK--EATLQRYAEHKSPRDLDSSQKRFILHG 305
Query: 451 ETI 459
+++
Sbjct: 306 QSL 308
>08_01_0801 - 7750548-7751708
Length = 386
Score = 31.9 bits (69), Expect = 0.32
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +1
Query: 64 FSTLQQNGEFVDMTLASDGRFVKVHQVLLALASPYLK-DL--IASAPCPHPIIFLNNVSH 234
F+ L Q+ E D+T G VH+++LA+ SP K +L + P PI + ++
Sbjct: 191 FANLLQSKEGADVTFDVAGEPFSVHKLVLAMRSPVFKAELCGLLREPGTQPITIV-DMQP 249
Query: 235 HTLCLLLEYIYTGE 276
LL++IYT +
Sbjct: 250 AVFRALLQFIYTDQ 263
>06_03_1104 +
27623632-27623795,27624052-27624175,27624316-27624832,
27624943-27625073,27625161-27625567,27625690-27625963,
27626195-27626814,27627424-27627859
Length = 890
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 250 LLEYIYTGEVIVAGDYLQQFIEAAKSLHIKGLQNIIPND 366
+LEY YT V+V D ++ AK H+K LQ ++ +
Sbjct: 683 ILEYTYTNSVMVDDDNIKPVRTLAKYCHLKSLQEMLQKE 721
>02_04_0471 +
23192001-23192102,23192229-23192356,23192440-23193108,
23193900-23194086
Length = 361
Score = 31.9 bits (69), Expect = 0.32
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = +1
Query: 49 SICDGFSTLQQNGEFVDMTLASDGRFVKVHQVLLALASPYLKDLIASAPCPHPIIFLNNV 228
++ FS L + V + A DG ++ H +LA ASP L+ +I AP ++ +
Sbjct: 2 ALSTAFSALPTSPADVRVVTA-DGSGIRAHSSVLASASPVLERMIEQAP-RGGVVPIAGA 59
Query: 229 SHHTLCLLLEYIYTGEV--IVAGDYLQQFIEAAKSLH 333
S + + L ++Y V A ++ EAA + H
Sbjct: 60 STGAVVVFLRFLYAASVRGAAAAAAAAEWEEAALAEH 96
>08_01_0811 -
7872886-7873261,7873446-7873861,7874253-7874262,
7874370-7875334
Length = 588
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +1
Query: 88 EFVDMTLASDGRFVKVHQVLLALASPYLK-----DLIASAPCPHPIIFLNNVSHHTLCLL 252
E D+T + DG H+V+LA+ SP + ++ S PI ++++ L
Sbjct: 173 EGADVTFSVDGELFAAHRVILAMRSPVFRAAVYGEMRESGRGGGPIA-IDDMRPDVFDAL 231
Query: 253 LEYIYTGEVIVAGD 294
L YIYT + A D
Sbjct: 232 LRYIYTDALPAAAD 245
>08_01_0794 - 7687480-7687798,7687817-7688523
Length = 341
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 46 SSICDGFSTLQQNGEFVDMTLASDGRFVKVHQVLLALASPYLK 174
S I + F L + GE D+T G + H+++LA S K
Sbjct: 174 SDILENFGELLEKGEGADVTFVVGGEKIAAHKIVLAARSSVFK 216
>04_04_1221 + 31845938-31847038
Length = 366
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 46 SSICDGFSTLQQNGEFVDMTLASDGRFVKVHQVLLALASPYLK 174
S++ F + Q+GE D+T G+ + H+ +LA SP K
Sbjct: 178 SNLHTDFENMLQDGEGSDVTFTVGGQEFRAHKCVLAFRSPVFK 220
>08_01_0799 + 7734031-7735102,7735453-7735475
Length = 364
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 46 SSICDGFSTLQQNGEFVDMTLASDGRFVKVHQVLLALASPYLK 174
S + + F L + GE D+T G + H+++LA S K
Sbjct: 175 SDLSENFGELLEKGEGSDVTFVVGGEKIAAHKIILAARSSVFK 217
>08_01_0199 + 1628158-1629192
Length = 344
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 82 NGEFVDMTLASDGRFVKVHQVLLALASPYLKDLIASAPCPH--PIIFLNNVSHHTLCLLL 255
+G D+T G+ H+++LA+ SP + + H P I ++++ LL
Sbjct: 195 DGVGADVTFDVRGQPFAAHRIVLAMRSPVFMASLYGSMREHRAPRIAVDDMEPEVFDALL 254
Query: 256 EYIYTGEVIVAGD 294
++Y+ + + GD
Sbjct: 255 RFVYSDTLALPGD 267
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 28.7 bits (61), Expect = 3.0
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +1
Query: 49 SICDGFSTLQQNGEFV--DMTLASD-GRFVKVHQVLLALASPYLKDLIASAPCPHPIIFL 219
S+ D + L+Q E D LA G F VH L+ + ++ I A + F
Sbjct: 103 SVIDSYLLLKQGSEVTEDDFFLACVLGCFKHVHYYLMTSWTIHIPGEIRFAGTGD-LRFF 161
Query: 220 NNVSHHTLCLLLEYIYTGEVIVAGDYLQQ 306
N SH TL LL+ TG +++ +L Q
Sbjct: 162 NPSSHDTLILLISCNKTGHLVLPPIFLLQ 190
>03_05_0605 -
26066394-26066776,26067466-26067497,26069075-26069300,
26069422-26069613,26070069-26070828,26071044-26071583
Length = 710
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 118 GRFVKVHQVLLALASPYLKDLIASAPCPHP 207
G V VH+ +LA S + D +SAP P P
Sbjct: 66 GAVVGVHRCILAARSRFFYDHFSSAPAPAP 95
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 46 SSICDGFSTLQQNGEFVDMTLASDGRFVKVHQVLLALASPYLK 174
S++ L +G+ D+T DG H+V+LA SP +
Sbjct: 295 SNMSQHIGQLLTDGKRTDITFEVDGEVFPAHKVVLAARSPVFR 337
>09_04_0093 - 14550806-14552452
Length = 548
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 323 LAASINCCR*SPATITSPVYMYSRSKHNVWWDTLLRNIIGCGQGAEAIKSF 171
LAA + CC A + + +V W T++ + G+ AEA++ F
Sbjct: 233 LAAYVRCCEMDAALW---FFNEMPGRDSVAWTTMIAGCVNAGKAAEAVELF 280
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,067,329
Number of Sequences: 37544
Number of extensions: 216412
Number of successful extensions: 679
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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