Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327A07f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0683 + 10363963-10364037,10364112-10364185,10364312-103644... 91 7e-19
05_03_0610 - 16167557-16167679,16168236-16168418,16169291-161694... 90 1e-18
02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679 39 0.002
12_01_0191 + 1413287-1413346,1413504-1413632,1416819-1416998,141... 29 1.7
01_05_0561 - 23296977-23297174,23297304-23297431,23297990-232983... 29 2.3
04_01_0483 + 6343599-6343778,6343886-6344011,6344096-6344173,634... 29 3.0
04_01_0480 + 6279576-6279755,6279863-6279988,6280074-6280151,628... 29 3.0
03_02_0488 - 8824980-8825267,8825364-8827775 29 3.0
04_03_0579 + 17481012-17481219,17481776-17481849,17482207-174822... 28 4.0
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 28 5.2
04_01_0485 + 6389646-6389665,6390063-6390123,6390231-6390356,639... 28 5.2
03_04_0228 - 18989688-18989807,18990300-18990345,18990452-189905... 27 6.9
02_04_0525 - 23672984-23673085,23673315-23673419,23673820-236739... 27 6.9
05_05_0120 + 22520285-22520569 27 9.1
01_01_0823 - 6407635-6407731,6407786-6407857,6409766-6409872 27 9.1
>03_02_0683 +
10363963-10364037,10364112-10364185,10364312-10364435,
10365047-10365229,10365478-10365600
Length = 192
Score = 90.6 bits (215), Expect = 7e-19
Identities = 44/88 (50%), Positives = 64/88 (72%)
Frame = +3
Query: 258 GKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKL 437
GK VV V R+I+ P + V +RPR+RTLT+V+D ILED+V+PAEIVGKRIR +L
Sbjct: 90 GKDVVIVATRRIVRPPKKGSAV----QRPRTRTLTAVHDGILEDVVYPAEIVGKRIRYRL 145
Query: 438 DGSQLIKVHLDKNQQTTIEHXVDTFQSV 521
DG+++IK+ LD ++ E+ ++TF +V
Sbjct: 146 DGAKVIKIFLDPKERNNTEYKLETFSAV 173
Score = 78.6 bits (185), Expect = 3e-15
Identities = 39/81 (48%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Frame = +2
Query: 17 IIKASGAEADSFETSISQALVELET-NSDLKAQLRELYITKAKEIELH-NKKSIIIYVPM 190
I K G E FE S++QA +LE N +LK++L++LYI A ++++ N+K+++I+VP
Sbjct: 8 IQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKAVVIHVPY 67
Query: 191 PKLKAFQKIQIRLVRELEKKF 253
KAF+KI +RLVRELEKKF
Sbjct: 68 RLRKAFKKIHVRLVRELEKKF 88
>05_03_0610 -
16167557-16167679,16168236-16168418,16169291-16169414,
16169514-16169626,16169668-16169742
Length = 205
Score = 89.8 bits (213), Expect = 1e-18
Identities = 44/88 (50%), Positives = 61/88 (69%)
Frame = +3
Query: 258 GKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKL 437
GK VV V R+I+ P + V RPR+RTLT+V+D ILED+V+PAEIVGKR+R L
Sbjct: 103 GKDVVLVATRRIVRPPKKGSAVV----RPRTRTLTAVHDGILEDVVYPAEIVGKRVRYHL 158
Query: 438 DGSQLIKVHLDKNQQTTIEHXVDTFQSV 521
DG +++K+ LD ++ E+ +DTF SV
Sbjct: 159 DGRKIMKIFLDPKERNNTEYKLDTFSSV 186
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/64 (53%), Positives = 48/64 (75%), Gaps = 2/64 (3%)
Frame = +2
Query: 68 QALVELET-NSDLKAQLRELYITKAKEIELH-NKKSIIIYVPMPKLKAFQKIQIRLVREL 241
QA +LE N +LK+ L++LYI A +++L N+K++IIYVP KA++KI +RLVREL
Sbjct: 38 QAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKAVIIYVPYRLRKAYKKIHVRLVREL 97
Query: 242 EKKF 253
EKKF
Sbjct: 98 EKKF 101
>02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679
Length = 129
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2
Query: 122 LYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKF 253
+Y+ ++ N K ++I+V KAF+KI +RLV+ELEKKF
Sbjct: 31 MYVCSQMDVAA-NWKVVVIHVLYHLCKAFKKIHVRLVKELEKKF 73
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +3
Query: 258 GKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVG 416
GK VVF R+I+ +P +K + PR+RTL +V+D ILED+V ++G
Sbjct: 75 GKDVVFDATRRIV-RPLNKGSAVH---HPRTRTLITVHDGILEDVVSQLRLLG 123
>12_01_0191 +
1413287-1413346,1413504-1413632,1416819-1416998,
1417747-1417938,1418533-1418673,1418785-1418912,
1419088-1419262,1419664-1419852,1420628-1420749,
1420829-1420874
Length = 453
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 342 PRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIK 458
P +RTLT+ +D IL+D + A+I GK + + + +IK
Sbjct: 86 PNTRTLTNAHDGILDD-INCAQIAGKHVGDHSNCANVIK 123
>01_05_0561 -
23296977-23297174,23297304-23297431,23297990-23298362,
23298629-23299069
Length = 379
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 194 KLKAFQKIQIRLVRELEKKFQW*TC 268
K+ AF K+Q L+R + KKF W TC
Sbjct: 308 KVVAFNKMQ--LIRNVSKKFDWVTC 330
>04_01_0483 +
6343599-6343778,6343886-6344011,6344096-6344173,
6344859-6344984,6345253-6345354,6345425-6345571,
6345861-6345984,6346992-6347152
Length = 347
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/45 (22%), Positives = 23/45 (51%)
Frame = +2
Query: 74 LVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 208
LVE+ D ++ + Y+ + L++K +++Y+ K+ F
Sbjct: 113 LVEIRAGGDNMDKMYKFYVYPPHRVRLYSKDDVLLYIKEMKISGF 157
>04_01_0480 +
6279576-6279755,6279863-6279988,6280074-6280151,
6280847-6280972,6281244-6281345,6281416-6281490,
6281852-6281975,6283005-6283107,6283546-6283617,
6283662-6283788,6284125-6284180,6284438-6284453
Length = 394
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 74 LVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 208
LVE+ D ++ + Y+ + L +K ++IY+ K+ F
Sbjct: 113 LVEIRAGGDNMDKMYKFYVYPPNRVRLFSKDDVLIYIKEMKISGF 157
>03_02_0488 - 8824980-8825267,8825364-8827775
Length = 899
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 23 KASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIY-VPMPKL 199
++SG + FET +S A++E+E N+ L + +K+I H++ I Y P+P +
Sbjct: 305 QSSGVTGEVFETLVSSAVMEMERNASLSP------VGFSKDIGQHHEFPRIPYSCPLPIM 358
Query: 200 KAFQKI 217
+ +++
Sbjct: 359 DSSEEL 364
>04_03_0579 +
17481012-17481219,17481776-17481849,17482207-17482211,
17482523-17482607,17484144-17484231,17484307-17484398,
17484903-17485055
Length = 234
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 439 SNLTLMRLPTISAGKTKSSRIASYTEVNVLERGLFCLLATRVLWLGLGRILR----SPTK 272
S LTL P + A + S S+ V L +GL C+++ +V +L L RI K
Sbjct: 55 SLLTLCLNPIVFAPQCMESLEISFARV-ALCKGLACVISEQVRYLALVRIAHILHVCHQK 113
Query: 271 TTCLPLELLFELT 233
+P+ LL ++T
Sbjct: 114 LRAIPIALLCKMT 126
>06_01_0983 -
7630651-7630683,7630717-7630942,7630993-7631234,
7631502-7631591,7631680-7631845,7632225-7633191,
7633402-7633591,7633908-7634048,7634416-7634736
Length = 791
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 393 VFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEH 497
+FPA I G + KLD ++L K H D+ + ++H
Sbjct: 589 IFPARIGGYLLDSKLDRNEL-KKHFDQTRANRLDH 622
>04_01_0485 +
6389646-6389665,6390063-6390123,6390231-6390356,
6390441-6390518,6391304-6391429,6391630-6391731,
6391802-6391948,6392237-6392360,6393608-6393737,
6393908-6394130
Length = 378
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/45 (22%), Positives = 22/45 (48%)
Frame = +2
Query: 74 LVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 208
LVE+ D ++ + Y+ + L +K +++Y+ K+ F
Sbjct: 80 LVEIRAGGDNMDKMYKFYVYPPNRVRLFSKDDVLLYIKEMKISGF 124
>03_04_0228 -
18989688-18989807,18990300-18990345,18990452-18990552,
18990624-18990702,18990788-18990868,18991440-18991502,
18994171-18994246,18994980-18995246,18995994-18996076,
18996792-18996922,18997043-18997174
Length = 392
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 329 QTKEATLKDIDLCVRCYPRGLG 394
Q ++++LK CVRC+P G G
Sbjct: 184 QKRDSSLKYQTRCVRCFPNGTG 205
>02_04_0525 -
23672984-23673085,23673315-23673419,23673820-23673979,
23674085-23674162,23674383-23674524,23674641-23674785,
23674888-23674950,23675042-23675101,23675364-23675441,
23675524-23675598,23675744-23675860,23675960-23676190,
23676300-23676419,23676512-23676588,23676669-23676769,
23676844-23676950,23677094-23677251,23677383-23677599
Length = 711
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -3
Query: 192 GIGT*MMIDFLLCSSISLAFVM*SSRSWALRSELVSSSTSACEIEVSKESASAPLALMIP 13
GIG +DF S+ + SSR L ++ SSST + +E+ S +P L++P
Sbjct: 19 GIGFTRSVDFAKILSVPATLRVGSSRGRVLVAK--SSSTGSDTMELEPSSEGSP--LLVP 74
Query: 12 RAEF 1
R ++
Sbjct: 75 RQKY 78
>05_05_0120 + 22520285-22520569
Length = 94
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -3
Query: 405 QQGRPSPRG*HRTQRSMSLSVAS 337
QQ RPSP HR R+MS++VAS
Sbjct: 56 QQARPSPAARHR--RAMSVAVAS 76
>01_01_0823 - 6407635-6407731,6407786-6407857,6409766-6409872
Length = 91
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 71 ALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIY 181
A++E+E N DL + L T+ E H + S++IY
Sbjct: 2 AILEIEDNDDLLSLPGSLANTRIGESPSHQRDSLLIY 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,502,791
Number of Sequences: 37544
Number of extensions: 265781
Number of successful extensions: 674
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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