Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327A07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical pr...   108   3e-24
U23486-3|AAL38955.1|  529|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL034393-8|CAA22313.1|  241|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF039050-2|AAC47935.1|  499|Caenorhabditis elegans Cytochrome p4...    29   2.7  
U23179-7|AAC46721.1|  782|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical
           protein ZC434.2 protein.
          Length = 194

 Score =  108 bits (259), Expect = 3e-24
 Identities = 49/89 (55%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
 Frame = +3

Query: 258 GKHVVFVGDRKILPKPSHKTRVA-NKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVK 434
           G+ ++ +  R+ILPKP   ++    KQKRPRSRTLT+V+DA L++LV+PAE+VG+RIRVK
Sbjct: 88  GRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVHDAWLDELVYPAEVVGRRIRVK 147

Query: 435 LDGSQLIKVHLDKNQQTTIEHXVDTFQSV 521
           LDG ++ KVHLDK+ QT + H +  F SV
Sbjct: 148 LDGKKVYKVHLDKSHQTNVGHKIGVFASV 176



 Score =   99 bits (238), Expect = 1e-21
 Identities = 46/79 (58%), Positives = 60/79 (75%)
 Frame = +2

Query: 17  IIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPK 196
           ++K+ G      E  +SQAL++LETN D+++QL+ELYI   KE+EL NK +IIIYVP+P+
Sbjct: 8   LLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVPQ 67

Query: 197 LKAFQKIQIRLVRELEKKF 253
           LKAF KI   LVRELEKKF
Sbjct: 68  LKAFHKIHPALVRELEKKF 86


>U23486-3|AAL38955.1|  529|Caenorhabditis elegans Hypothetical
           protein F07F6.4 protein.
          Length = 529

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +3

Query: 78  SNSKPTPTSKPNFGSFTLQKLKKLNYTIRSRSSSMCR 188
           S+SK T      F SF  Q ++K  YT  S SSS  R
Sbjct: 376 SSSKKTTKEDDFFDSFETQPVQKSRYTASSSSSSTSR 412


>AL034393-8|CAA22313.1|  241|Caenorhabditis elegans Hypothetical
           protein Y18D10A.10 protein.
          Length = 241

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 313 LWLGLGRILRSPTKTTCLPLELLFELTD 230
           +W+G  R  R P K +C PL+  FE TD
Sbjct: 143 VWVGAYRKARCPNKPSCTPLD-TFEWTD 169


>AF039050-2|AAC47935.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 34A5 protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 313 LWLGLGRILRSPTKTTCLPLELLFEL 236
           LWL   RILR  TK T  P + ++EL
Sbjct: 222 LWLLKSRILRWRTKVTMAPFDFVYEL 247


>U23179-7|AAC46721.1|  782|Caenorhabditis elegans Hypothetical
           protein C27D6.1 protein.
          Length = 782

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +2

Query: 8   ARGIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSI 172
           AR  I+A   +     T  S+ L ELE       Q +E +  K++E+E+ NK+ +
Sbjct: 248 ARKEIEAEAEKWKDRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQLV 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,371,531
Number of Sequences: 27780
Number of extensions: 223636
Number of successful extensions: 624
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)