Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327A05f
(493 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z82076-1|CAB04934.1| 363|Caenorhabditis elegans Hypothetical pr... 28 3.2
AF047657-2|AAK18950.2| 358|Caenorhabditis elegans Serpentine re... 28 3.2
AF047662-3|AAC04443.2| 263|Caenorhabditis elegans Hypothetical ... 28 4.2
AF039053-12|AAC25872.3| 289|Caenorhabditis elegans Serpentine r... 28 4.2
Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z77655-3|CAB01134.1| 426|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z71265-5|CAA95836.1| 481|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z82287-1|CAB05316.1| 366|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical
protein T01B11.1 protein.
Length = 343
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +3
Query: 126 IQRCRFEIRKQNSKRSHEISINLCPEIVSIRSNTTFVFFI-----FLYMXLFNQI 275
++RC Q S + ++ LC EI S+R++T+ ++ F+Y+ F+ I
Sbjct: 253 VRRCLMMATIQVSLNAPYYTLQLCDEIFSLRNSTSLYLYLDAILYFIYLLQFSMI 307
>Z82076-1|CAB04934.1| 363|Caenorhabditis elegans Hypothetical
protein W07G1.2 protein.
Length = 363
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 148 YENKTPRDHTKYQSICVPKSFQFVAILHSFFLSFYIXIYLIKFFMLP--LN*IYFWIKEN 321
YE K PR H I ++F F++ + FF +Y++ ++P ++ + F + EN
Sbjct: 159 YEKK-PRIHLVVILIIGHQTFNFISAILHFFQILQNLVYIVLIALIPNVVSSVIFAVTEN 217
Query: 322 XN 327
N
Sbjct: 218 YN 219
>AF047657-2|AAK18950.2| 358|Caenorhabditis elegans Serpentine
receptor, class h protein270 protein.
Length = 358
Score = 28.3 bits (60), Expect = 3.2
Identities = 9/47 (19%), Positives = 29/47 (61%)
Frame = +3
Query: 174 HEISINLCPEIVSIRSNTTFVFFIFLYMXLFNQILYVAIKLNIFLDK 314
H+++ N C ++++ +++ +F I ++ + ++++ +K +IF K
Sbjct: 272 HQVANNFCSLLLAVHGSSSSIFLILIHKS-YRKVVWDLLKFDIFTRK 317
>AF047662-3|AAC04443.2| 263|Caenorhabditis elegans Hypothetical
protein T22B2.5 protein.
Length = 263
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 180 FRVISWSFVFVSRICTVVYCSL 115
FRVI W F+ +C VY SL
Sbjct: 131 FRVIFWIFIVFIHLCQAVYVSL 152
>AF039053-12|AAC25872.3| 289|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 18 protein.
Length = 289
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 202 KSFQFVAILHSFFLSFYIXIYLIKFFMLPLN*IYFW--IKENXNTIFYYG 345
K + FFL I + +I + ++ ++ YFW + N IFY+G
Sbjct: 39 KKNDMILFYFRFFLDASIGLLVIFYLLVVISLSYFWNTFADYQNFIFYFG 88
>Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical
protein W02D9.3 protein.
Length = 386
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/67 (22%), Positives = 34/67 (50%)
Frame = +2
Query: 8 VFTRCFITKNRTKCSVAQSIVFSRPRLKLNLVQLRYRLQYTTVQIRDTKTKLQEITRNIN 187
+FT F+T N+T+ + + + R ++ L L V+I +T+++E I
Sbjct: 267 IFTPEFMTYNKTRDTYRRQLAIERSHVEHELEALHQ--HDMDVRIEQQETRIREADEKIE 324
Query: 188 QSVSRNR 208
+++++ R
Sbjct: 325 ETMAKMR 331
>Z77655-3|CAB01134.1| 426|Caenorhabditis elegans Hypothetical
protein C56A3.3 protein.
Length = 426
Score = 27.1 bits (57), Expect = 7.4
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 120 YNIQRC-RFEIRKQNSKRSHEISINLCPEIVSIRSNTTFVFFIFLYMXLFNQI-LYVAIK 293
YN R +F +RK + + E I +CP + + N+ V+ I++YM L + + +
Sbjct: 166 YNSLRFPQFNLRKCFNDITKEQVIEICPTSLFVTINS--VYNIYMYMVLMTLLPFFFLLC 223
Query: 294 LNIFLDKRK 320
+N + KR+
Sbjct: 224 INAIIVKRQ 232
>Z71265-5|CAA95836.1| 481|Caenorhabditis elegans Hypothetical
protein M05B5.6 protein.
Length = 481
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Frame = +3
Query: 144 EIRKQNSKRSHEISINLCPEIVSIRSN-----TTFVF 239
E+ +N K + EISI+ C E IR N TTF+F
Sbjct: 10 ELGHRNEKINDEISIDFCNERSRIRRNKAEDSTTFIF 46
>Z82287-1|CAB05316.1| 366|Caenorhabditis elegans Hypothetical
protein ZK550.1 protein.
Length = 366
Score = 26.6 bits (56), Expect = 9.8
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 111 DTDYNIQRCRF-EIRKQNSKRSHEISINLCPEIVSIRSN-TTFVFFIFLYMXLFNQILYV 284
+TD N+ +F + + SH I C + R+ TT + FIFLY N+I +
Sbjct: 28 ETDMNLDGLKFLPVTLLSCLLSHWFRIQFCDASRTARAAVTTPIGFIFLYFCYGNEIAHF 87
Query: 285 AI 290
I
Sbjct: 88 FI 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,195,899
Number of Sequences: 27780
Number of extensions: 163992
Number of successful extensions: 485
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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