Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327A04f
(509 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 202 7e-52
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 202 7e-52
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 202 7e-52
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 202 7e-52
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 202 7e-52
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 202 7e-52
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 198 7e-51
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 78 2e-14
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 32 1.3
BX119957-17|CAM25921.1| 433|Homo sapiens chromosome 6 open read... 30 5.4
BC064397-1|AAH64397.1| 433|Homo sapiens C6orf136 protein protein. 30 5.4
AL732442-10|CAI17760.2| 433|Homo sapiens chromosome 6 open read... 30 5.4
AL662800-21|CAI95540.2| 433|Homo sapiens chromosome 6 open read... 30 5.4
AL662798-7|CAI95541.2| 433|Homo sapiens chromosome 6 open readi... 30 5.4
BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven thro... 29 7.1
AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein. 29 7.1
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 202 bits (492), Expect = 7e-52
Identities = 90/125 (72%), Positives = 110/125 (88%)
Frame = -1
Query: 506 AIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL 327
AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +
Sbjct: 35 AIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHM 94
Query: 326 LRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERE 147
L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+E+E
Sbjct: 95 LKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKE 154
Query: 146 DAVXR 132
V +
Sbjct: 155 QIVPK 159
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 202 bits (492), Expect = 7e-52
Identities = 90/125 (72%), Positives = 110/125 (88%)
Frame = -1
Query: 506 AIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL 327
AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +
Sbjct: 35 AIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHM 94
Query: 326 LRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERE 147
L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+E+E
Sbjct: 95 LKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKE 154
Query: 146 DAVXR 132
V +
Sbjct: 155 QIVPK 159
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 202 bits (492), Expect = 7e-52
Identities = 90/125 (72%), Positives = 110/125 (88%)
Frame = -1
Query: 506 AIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL 327
AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +
Sbjct: 35 AIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHM 94
Query: 326 LRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERE 147
L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+E+E
Sbjct: 95 LKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKE 154
Query: 146 DAVXR 132
V +
Sbjct: 155 QIVPK 159
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 202 bits (492), Expect = 7e-52
Identities = 90/125 (72%), Positives = 110/125 (88%)
Frame = -1
Query: 506 AIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL 327
AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +
Sbjct: 35 AIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHM 94
Query: 326 LRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERE 147
L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+E+E
Sbjct: 95 LKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKE 154
Query: 146 DAVXR 132
V +
Sbjct: 155 QIVPK 159
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 202 bits (492), Expect = 7e-52
Identities = 90/125 (72%), Positives = 110/125 (88%)
Frame = -1
Query: 506 AIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL 327
AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +
Sbjct: 35 AIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHM 94
Query: 326 LRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERE 147
L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+E+E
Sbjct: 95 LKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKE 154
Query: 146 DAVXR 132
V +
Sbjct: 155 QIVPK 159
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 202 bits (492), Expect = 7e-52
Identities = 90/125 (72%), Positives = 110/125 (88%)
Frame = -1
Query: 506 AIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL 327
AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +
Sbjct: 35 AIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHM 94
Query: 326 LRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERE 147
L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+E+E
Sbjct: 95 LKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKE 154
Query: 146 DAVXR 132
V +
Sbjct: 155 QIVPK 159
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 198 bits (484), Expect = 7e-51
Identities = 89/125 (71%), Positives = 109/125 (87%)
Frame = -1
Query: 506 AIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL 327
AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +
Sbjct: 35 AIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHM 94
Query: 326 LRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERE 147
L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRA GRINPYMSSPCHIE+ L+E+E
Sbjct: 95 LKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRARGRINPYMSSPCHIEMILTEKE 154
Query: 146 DAVXR 132
V +
Sbjct: 155 QIVPK 159
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 78.2 bits (184), Expect = 2e-14
Identities = 36/70 (51%), Positives = 51/70 (72%)
Frame = -1
Query: 359 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 180
PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP + TYRAHG+INPY++S
Sbjct: 21 PKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTSA 79
Query: 179 CHIEVCLSER 150
CHIE+ L+E+
Sbjct: 80 CHIEMILTEK 89
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 31.9 bits (69), Expect = 1.3
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 285 RGQASHRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHR-SMSQRTRR 145
R +S R HS S+ L +Q++ P SRSH P PH S S R+ R
Sbjct: 89 RACSSRRAHSSWSQNLHSQSHSPHSRSHSPHSRSHSPHSWSHSLRSSR 136
>BX119957-17|CAM25921.1| 433|Homo sapiens chromosome 6 open reading
frame 136 protein.
Length = 433
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3
Query: 288 GRGQASHRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHRSMSQRTRRCCRQG 130
GRG+ P + SR+ P QT P R QP ++L RS + C R G
Sbjct: 67 GRGREIRSPAAAPSRSSPAQTR-PAGRPQQPAR-LALGERSWQEGRPVCTRFG 117
>BC064397-1|AAH64397.1| 433|Homo sapiens C6orf136 protein protein.
Length = 433
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3
Query: 288 GRGQASHRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHRSMSQRTRRCCRQG 130
GRG+ P + SR+ P QT P R QP ++L RS + C R G
Sbjct: 67 GRGREIRSPAAAPSRSSPAQTR-PAGRPQQPAR-LALGERSWQEGRPVCTRFG 117
>AL732442-10|CAI17760.2| 433|Homo sapiens chromosome 6 open reading
frame 136 protein.
Length = 433
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3
Query: 288 GRGQASHRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHRSMSQRTRRCCRQG 130
GRG+ P + SR+ P QT P R QP ++L RS + C R G
Sbjct: 67 GRGREIRSPAAAPSRSSPAQTR-PAGRPQQPAR-LALGERSWQEGRPVCTRFG 117
>AL662800-21|CAI95540.2| 433|Homo sapiens chromosome 6 open reading
frame 136 protein.
Length = 433
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3
Query: 288 GRGQASHRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHRSMSQRTRRCCRQG 130
GRG+ P + SR+ P QT P R QP ++L RS + C R G
Sbjct: 67 GRGREIRSPAAAPSRSSPAQTR-PAGRPQQPAR-LALGERSWQEGRPVCTRFG 117
>AL662798-7|CAI95541.2| 433|Homo sapiens chromosome 6 open reading
frame 136 protein.
Length = 433
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3
Query: 288 GRGQASHRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHRSMSQRTRRCCRQG 130
GRG+ P + SR+ P QT P R QP ++L RS + C R G
Sbjct: 67 GRGREIRSPAAAPSRSSPAQTR-PAGRPQQPAR-LALGERSWQEGRPVCTRFG 117
>BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven
thrombospondin repeats (type 1 and type 1-like),
transmembra protein.
Length = 1151
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 179 RETTCRG*CDREHGMYVCVGRARDLPECGR*LACPRPKF 295
R+ +C R HG +CVG++R+ C CP P F
Sbjct: 687 RQRSCSNPAPR-HGGRICVGKSREERFCNENTPCPVPIF 724
>AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein.
Length = 1202
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 179 RETTCRG*CDREHGMYVCVGRARDLPECGR*LACPRPKF 295
R+ +C R HG +CVG++R+ C CP P F
Sbjct: 738 RQRSCSNPAPR-HGGRICVGKSREERFCNENTPCPVPIF 775
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,601,806
Number of Sequences: 237096
Number of extensions: 1304783
Number of successful extensions: 3079
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3079
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -