Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326H09f
         (415 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    27   5.4  
Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    27   5.4  
AL117202-24|CAD27612.1|  565|Caenorhabditis elegans Hypothetical...    27   5.4  
AL117199-3|CAB55043.3|  868|Caenorhabditis elegans Hypothetical ...    27   7.1  

>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 280 CLKRSVEEAD*SAHLNIDDMHCI*CLEGSLTSKLS 384
           CL R   + D ++H+ +  M C+ CL     S LS
Sbjct: 784 CLGRKKRDTDENSHIRVKRMGCLPCLGRKKRSTLS 818


>Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical
           protein K08E7.5d protein.
          Length = 541

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 280 CLKRSVEEAD*SAHLNIDDMHCI*CLEGSLTSKLS 384
           CL R   + D ++H+ +  M C+ CL     S LS
Sbjct: 429 CLGRKKRDTDENSHIRVKRMGCLPCLGRKKRSTLS 463


>Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E7.5b protein.
          Length = 493

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 280 CLKRSVEEAD*SAHLNIDDMHCI*CLEGSLTSKLS 384
           CL R   + D ++H+ +  M C+ CL     S LS
Sbjct: 381 CLGRKKRDTDENSHIRVKRMGCLPCLGRKKRSTLS 415


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
            K08E7.5a protein.
          Length = 1221

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 280  CLKRSVEEAD*SAHLNIDDMHCI*CLEGSLTSKLS 384
            CL R   + D ++H+ +  M C+ CL     S LS
Sbjct: 1109 CLGRKKRDTDENSHIRVKRMGCLPCLGRKKRSTLS 1143


>AL117202-24|CAD27612.1|  565|Caenorhabditis elegans Hypothetical
           protein Y47D3A.30 protein.
          Length = 565

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 164 SLGWSLIPKTSLQ*GVFQVFMTFLFHPN 81
           ++ WSL+P   L  G+F VF+ F F P+
Sbjct: 156 TINWSLLPIHLL--GIFYVFVAFNFRPS 181


>AL117199-3|CAB55043.3|  868|Caenorhabditis elegans Hypothetical
           protein Y43F11A.5 protein.
          Length = 868

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 358 PNIRCNACRLYSDGHFNPPLPHFFSNKIM*LLIFLNPLLK 239
           P  R   C  Y D + NP   ++ +N+ + +L    PLL+
Sbjct: 261 PLFRFQICEEYIDTYENPSSENYLNNRFLRVLAMRIPLLR 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,008,714
Number of Sequences: 27780
Number of extensions: 176887
Number of successful extensions: 293
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)