Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326H09f
         (415 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   2.4  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   3.2  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   4.2  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   4.2  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   5.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   7.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   7.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   7.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   7.3  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 199 LFIDNNLNLHFLHTSIEDLKKLTAT*SCLKRSVEE 303
           L IDN     +L   I +  +L  T +C+ R ++E
Sbjct: 370 LTIDNLRKAKYLRACITESLRLIPTTTCIARILDE 404


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 130 RLVLGMSDHPRDRTICRGSYMFTLFIDNNL 219
           RLV    D     +  + S +   FIDNNL
Sbjct: 98  RLVNNCKDITESNSCKKSSKLLQCFIDNNL 127


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 110 VFMTFLFHPNVC 75
           V +TFL HP+ C
Sbjct: 10  VLLTFLLHPSRC 21


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 110 VFMTFLFHPNVC 75
           V +TFL HP+ C
Sbjct: 10  VLLTFLLHPSRC 21


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 133 VSNEECFRYL*HFYFILMFVN 71
           V    CF+ +   YF++ +VN
Sbjct: 48  VQLHSCFQTMDRLYFVMEYVN 68


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 23  ICLKLVLLTLYYPKKRINK 79
           I   L ++ L +PKKR+ K
Sbjct: 211 IYYNLTMVKLNWPKKRVTK 229


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -1

Query: 85 LMFVNSFLWIVKCE 44
          ++FVNSFL+++  +
Sbjct: 14 VLFVNSFLFVIAAQ 27


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -1

Query: 85 LMFVNSFLWIVKCE 44
          ++FVNSFL+++  +
Sbjct: 14 VLFVNSFLFVIAAQ 27


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -1

Query: 85 LMFVNSFLWIVKCE 44
          ++FVNSFL+++  +
Sbjct: 14 VLFVNSFLFVIAAQ 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,330
Number of Sequences: 438
Number of extensions: 2413
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)