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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326H01f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.15 
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    24   0.82 
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    24   0.82 
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    24   0.82 
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    24   0.82 
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    24   0.82 
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    24   0.82 
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    24   0.82 
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    24   0.82 
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    24   0.82 
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    24   0.82 
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    24   0.82 
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    24   0.82 
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   3.3  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   5.8  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   5.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   5.8  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 402 NELCLWFRNNFCSFR 446
           NE+  WF+N FC FR
Sbjct: 528 NEIYNWFQNTFCYFR 542


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRNNAY 218
           Y  YN+Y NN  Y NN Y
Sbjct: 91  YSNYNNY-NNNNYNNNNY 107


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRNNAY 218
           Y  YN+Y NN  Y NN Y
Sbjct: 91  YSNYNNY-NNNNYNNNNY 107


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRNNAY 218
           Y  YN+Y NN  Y NN Y
Sbjct: 91  YSNYNNY-NNNNYNNNNY 107


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRNNAY 218
           Y  YN+Y NN  Y NN Y
Sbjct: 91  YSNYNNY-NNNNYNNNNY 107


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRN 209
           Y  YN+Y NN  Y N
Sbjct: 91  YSNYNNYNNNNNYNN 105


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRN 209
           Y  YN+Y NN  Y N
Sbjct: 91  YSNYNNYNNNNNYNN 105


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRN 209
           Y  YN+Y NN  Y N
Sbjct: 91  YSNYNNYNNNNNYNN 105


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRN 209
           Y  YN+Y NN  Y N
Sbjct: 91  YSNYNNYNNNNNYNN 105


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRN 209
           Y  YN+Y NN  Y N
Sbjct: 91  YSNYNNYNNNNNYNN 105


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRN 209
           Y  YN+Y NN  Y N
Sbjct: 91  YSNYNNYNNNNNYNN 105


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRN 209
           Y  YN+Y NN  Y N
Sbjct: 91  YSNYNNYNNNNNYNN 105


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRN 209
           Y  YN+Y NN  Y N
Sbjct: 91  YSNYNNYNNNNNYNN 105


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 174 YNDYRNNTGYRNNAYD 221
           Y++Y N   Y NN Y+
Sbjct: 324 YSNYNNYNNYNNNNYN 339


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRNN 212
           Y  YN+Y NN    NN
Sbjct: 324 YSNYNNYNNNYNNYNN 339



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 171 YYNDYRNNTGYRNN 212
           Y N+Y N   Y NN
Sbjct: 330 YNNNYNNYNNYNNN 343


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 165 YCYYNDYRNNTGYRNN 212
           Y Y N+  NN  Y NN
Sbjct: 331 YNYNNNNYNNNNYNNN 346


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = -2

Query: 349 HQSENKEEHSRKFSYNQHHPKFENLQ 272
           HQ  NKE+       NQ   K   L+
Sbjct: 54  HQDHNKEKSKNNHHCNQDTEKLNQLE 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,412
Number of Sequences: 438
Number of extensions: 3521
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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