BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326H01f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 27 0.15
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 24 0.82
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 24 0.82
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 24 0.82
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 24 0.82
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 24 0.82
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 24 0.82
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 0.82
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 0.82
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 0.82
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 0.82
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 0.82
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 0.82
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 3.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 5.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 5.8
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 5.8
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 26.6 bits (56), Expect = 0.15
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 402 NELCLWFRNNFCSFR 446
NE+ WF+N FC FR
Sbjct: 528 NEIYNWFQNTFCYFR 542
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRNNAY 218
Y YN+Y NN Y NN Y
Sbjct: 91 YSNYNNY-NNNNYNNNNY 107
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRNNAY 218
Y YN+Y NN Y NN Y
Sbjct: 91 YSNYNNY-NNNNYNNNNY 107
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRNNAY 218
Y YN+Y NN Y NN Y
Sbjct: 91 YSNYNNY-NNNNYNNNNY 107
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRNNAY 218
Y YN+Y NN Y NN Y
Sbjct: 91 YSNYNNY-NNNNYNNNNY 107
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRN 209
Y YN+Y NN Y N
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.2 bits (50), Expect = 0.82
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRN 209
Y YN+Y NN Y N
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRN 209
Y YN+Y NN Y N
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRN 209
Y YN+Y NN Y N
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRN 209
Y YN+Y NN Y N
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRN 209
Y YN+Y NN Y N
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRN 209
Y YN+Y NN Y N
Sbjct: 91 YSNYNNYNNNNNYNN 105
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRN 209
Y YN+Y NN Y N
Sbjct: 91 YSNYNNYNNNNNYNN 105
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 174 YNDYRNNTGYRNNAYD 221
Y++Y N Y NN Y+
Sbjct: 324 YSNYNNYNNYNNNNYN 339
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRNN 212
Y YN+Y NN NN
Sbjct: 324 YSNYNNYNNNYNNYNN 339
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 171 YYNDYRNNTGYRNN 212
Y N+Y N Y NN
Sbjct: 330 YNNNYNNYNNYNNN 343
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 165 YCYYNDYRNNTGYRNN 212
Y Y N+ NN Y NN
Sbjct: 331 YNYNNNNYNNNNYNNN 346
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = -2
Query: 349 HQSENKEEHSRKFSYNQHHPKFENLQ 272
HQ NKE+ NQ K L+
Sbjct: 54 HQDHNKEKSKNNHHCNQDTEKLNQLE 79
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,412
Number of Sequences: 438
Number of extensions: 3521
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -