Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326G12f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027611-1|AAH27611.1|  696|Homo sapiens zinc finger, SWIM-type ...    30   5.7  
AL008726-9|CAC36014.1|  696|Homo sapiens zinc finger, SWIM-type ...    30   5.7  
AK056641-1|BAB71239.1|  696|Homo sapiens protein ( Homo sapiens ...    30   5.7  

>BC027611-1|AAH27611.1|  696|Homo sapiens zinc finger, SWIM-type
           containing 3 protein.
          Length = 696

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -1

Query: 254 ETGACIVLGNLFMSVFSTNCQNDVI*MCGNDCGKLLYRNYNNGSNL*LQLLYKQICYKFL 75
           E G+C      F   FS   + +       DC  + + N N+G+++   +LY Q+  KF+
Sbjct: 2   ELGSCFKTYEDFKECFSAYKRENRCSFILRDCVSVRFHNLNHGTSIREDILYVQV--KFV 59

Query: 74  C 72
           C
Sbjct: 60  C 60


>AL008726-9|CAC36014.1|  696|Homo sapiens zinc finger, SWIM-type
           containing 3 protein.
          Length = 696

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -1

Query: 254 ETGACIVLGNLFMSVFSTNCQNDVI*MCGNDCGKLLYRNYNNGSNL*LQLLYKQICYKFL 75
           E G+C      F   FS   + +       DC  + + N N+G+++   +LY Q+  KF+
Sbjct: 2   ELGSCFKTYEDFKECFSAYKRENRCSFILRDCVSVRFHNLNHGTSIREDILYVQV--KFV 59

Query: 74  C 72
           C
Sbjct: 60  C 60


>AK056641-1|BAB71239.1|  696|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32079 fis, clone OCBBF2000013. ).
          Length = 696

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -1

Query: 254 ETGACIVLGNLFMSVFSTNCQNDVI*MCGNDCGKLLYRNYNNGSNL*LQLLYKQICYKFL 75
           E G+C      F   FS   + +       DC  + + N N+G+++   +LY Q+  KF+
Sbjct: 2   ELGSCFKTYEDFKECFSAYKRENRCSFILRDCVSVRFHNLNHGTSIREDILYVQV--KFV 59

Query: 74  C 72
           C
Sbjct: 60  C 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,918,628
Number of Sequences: 237096
Number of extensions: 1181430
Number of successful extensions: 1600
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)