Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326G07f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0478 + 8775892-8776377 39 0.002
03_02_0485 - 8808139-8808618 38 0.004
03_02_0484 + 8805053-8805538 38 0.005
03_02_0483 - 8804021-8804485 38 0.006
01_01_0227 + 1933247-1933699 36 0.015
01_01_0229 - 1943473-1943922 32 0.24
06_01_1017 - 7951985-7952425 31 0.74
02_05_0811 + 31939414-31939660,31939766-31940181 30 1.3
02_05_0494 + 29486960-29487454 27 9.1
>03_02_0478 + 8775892-8776377
Length = 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Frame = -2
Query: 370 EQIQVKVADDFIVI-----EAKXEEKKDEQGFISRX---FVRKYKLPQGSQPNKITSTLS 215
E+++V+V D I+ + EEK D+ + R F+R+++LP ++P +I +++
Sbjct: 77 EEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASME 136
Query: 214 ADGVLKIVVPKETAVLKD 161
+GVL + VPKE A D
Sbjct: 137 -NGVLTVTVPKEEAKKPD 153
>03_02_0485 - 8808139-8808618
Length = 159
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Frame = -2
Query: 370 EQIQVKVADDFIVI-----EAKXEEKKDEQGFISRX---FVRKYKLPQGSQPNKITSTLS 215
E+++V+V D I+ + EEK D+ + R F+R+++LP+ ++P +I +++
Sbjct: 75 EEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASME 134
Query: 214 ADGVLKIVVPKE 179
+GVL + VPKE
Sbjct: 135 -NGVLTVTVPKE 145
>03_02_0484 + 8805053-8805538
Length = 161
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/72 (30%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Frame = -2
Query: 370 EQIQVKVADDFIVI-----EAKXEEKKDEQGFISRX---FVRKYKLPQGSQPNKITSTLS 215
E+++V+V D ++ + EEK D+ + R F+R+++LP+ ++P +I +++
Sbjct: 77 EEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASME 136
Query: 214 ADGVLKIVVPKE 179
+GVL + VPKE
Sbjct: 137 -NGVLTVTVPKE 147
>03_02_0483 - 8804021-8804485
Length = 154
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/72 (30%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Frame = -2
Query: 370 EQIQVKVADDFIVIEA-----KXEEKKDEQGFISRX---FVRKYKLPQGSQPNKITSTLS 215
E+++V+V D ++ + + EEK D+ + R F+R+++LP+ ++P +I +++
Sbjct: 70 EEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASME 129
Query: 214 ADGVLKIVVPKE 179
+GVL + VPKE
Sbjct: 130 -NGVLTVTVPKE 140
>01_01_0227 + 1933247-1933699
Length = 150
Score = 36.3 bits (80), Expect = 0.015
Identities = 19/64 (29%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -2
Query: 331 IEAKXEEKKDEQGFISRXFVRKYKLPQGSQPNKITSTLSADGVLKIVVPK-ETAVLKDTA 155
++ K +E+ S F R+++LP+G++ +++++++ +GVL + VPK ET + A
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMD-NGVLTVTVPKEETKKPQLKA 145
Query: 154 IPVA 143
IP++
Sbjct: 146 IPIS 149
>01_01_0229 - 1943473-1943922
Length = 149
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/71 (23%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Frame = -2
Query: 370 EQIQVKVADDFIVI-----EAKXEEKKDEQGFISRX---FVRKYKLPQGSQPNKITSTLS 215
E+++V+V + +++ + E+K D+ + R F+R+++LP+ ++ +++ +++
Sbjct: 65 EEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASME 124
Query: 214 ADGVLKIVVPK 182
+GVL + VPK
Sbjct: 125 -NGVLTVTVPK 134
>06_01_1017 - 7951985-7952425
Length = 146
Score = 30.7 bits (66), Expect = 0.74
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = -2
Query: 364 IQVKVADDFIVIEAKXEEKKDEQGFISRX----FVRKYKLPQGSQPNKITSTLSADGVLK 197
+ V+ A E + E +KD ++ F R+ LP + +I +++ +GVL
Sbjct: 65 LTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVD-NGVLT 123
Query: 196 IVVPKETAVLKDTAIPVA 143
+VVPKE A + P+A
Sbjct: 124 VVVPKEPAPARPRTRPIA 141
>02_05_0811 + 31939414-31939660,31939766-31940181
Length = 220
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = -2
Query: 424 KTQKDRLEINLLVKDFAAEQIQVKVADDFIVIEAKXEEK--KDEQGFISRXFVRKYKLPQ 251
K ++ L + + + E ++V + +VI+ + E++ +DE +R R P+
Sbjct: 124 KESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAAPARYSGRIELAPE 183
Query: 250 GSQPNKITSTLSADGVLKIVVPK 182
+ ++I + + +GVLK+VVPK
Sbjct: 184 VYRMDQIKAEMK-NGVLKVVVPK 205
>02_05_0494 + 29486960-29487454
Length = 164
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -2
Query: 283 RXFVRKYKLPQGSQPNKITSTLSADGVLKIVVPK 182
R V +++LP+ + ++ ++ + ADGVL + VPK
Sbjct: 106 RAAVTQFRLPEDAAADEASARM-ADGVLTVTVPK 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,258,938
Number of Sequences: 37544
Number of extensions: 221551
Number of successful extensions: 539
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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