Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326G05f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   5.8  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   7.7  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    21   7.7  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    21   7.7  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    21   7.7  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    21   7.7  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    21   7.7  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    21   7.7  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    21   7.7  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    21   7.7  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 434 NRTQLYNYNNKTKIVQFKRIRQTYFK 511
           N    YNYNNK         ++ Y+K
Sbjct: 93  NNNYKYNYNNKYNYNNNNYNKKLYYK 118


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 128 VPSHTLHSALGPRRFLYC 181
           VP  +LH  L  R F YC
Sbjct: 298 VPPLSLHGQLLWREFFYC 315


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 431 YNRTQLYNYNNKTKIVQFKRI 493
           YN +   NYNN      +K++
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKL 109


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 431 YNRTQLYNYNNKTKIVQFKRI 493
           YN +   NYNN      +K++
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKL 109


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 431 YNRTQLYNYNNKTKIVQFKRI 493
           YN +   NYNN      +K++
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKL 109


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 431 YNRTQLYNYNNKTKIVQFKRI 493
           YN +   NYNN      +K++
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKL 109


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 431 YNRTQLYNYNNKTKIVQFKRI 493
           YN +   NYNN      +K++
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKL 109


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 431 YNRTQLYNYNNKTKIVQFKRI 493
           YN +   NYNN      +K++
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKL 109


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 431 YNRTQLYNYNNKTKIVQFKRI 493
           YN +   NYNN      +K++
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKL 109


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 431 YNRTQLYNYNNKTKIVQFKRI 493
           YN +   NYNN      +K++
Sbjct: 89  YNYSNYNNYNNNNNYNNYKKL 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,952
Number of Sequences: 438
Number of extensions: 2804
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)