Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326F12f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0156 - 1780395-1780686,1780773-1781248,1781263-1781678,178... 31 0.56
01_06_1382 - 36856606-36857484,36857962-36858066,36858932-36859546 30 0.98
10_08_1026 + 22400551-22401161,22401437-22401632,22401837-224018... 30 1.3
06_03_1413 + 30004364-30004517,30004603-30005240 30 1.3
02_02_0376 + 9551050-9551525,9551966-9552278 29 1.7
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 2.3
04_03_0688 + 18731432-18732466,18733246-18733362 29 2.3
10_08_0153 - 15240707-15241019,15241269-15241723 29 3.0
02_03_0339 - 17909850-17910284 28 4.0
10_08_0924 - 21602510-21603578,21603759-21604275,21604360-21604390 28 5.2
10_08_0825 + 20831170-20831349,20831380-20831547,20831627-208316... 28 5.2
08_01_0621 - 5426210-5427787 28 5.2
07_01_0862 - 7172083-7172931 28 5.2
06_03_1223 - 28526869-28527192,28527515-28527634,28527742-285278... 28 5.2
03_05_1048 - 29950860-29951396,29951810-29952676 28 5.2
03_01_0260 - 1999462-1999488,1999748-1999930,2000940-2001146,200... 28 5.2
01_05_0519 - 22897277-22897986,22898126-22898225 28 5.2
10_03_0002 - 6858257-6861205 27 6.9
07_01_0042 - 334417-334431,334563-334688,334852-335136,335220-33... 27 6.9
02_03_0377 + 18319288-18319527,18319936-18320331 27 6.9
01_06_0243 + 27833497-27834042,27834144-27834238,27834400-27835567 27 6.9
11_01_0241 - 1858391-1859143,1859577-1859819 27 9.1
07_03_1180 - 24601631-24602142,24602518-24602581,24602811-246028... 27 9.1
05_05_0047 + 21860127-21860735,21862600-21863451 27 9.1
03_01_0383 + 2980693-2980816,2980908-2981226,2981315-2981624 27 9.1
>04_01_0156 -
1780395-1780686,1780773-1781248,1781263-1781678,
1781904-1782111
Length = 463
Score = 31.1 bits (67), Expect = 0.56
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +1
Query: 268 YPPLLSTVSDDMADNAVYNRQISTESGWDNPFRPDGDLSREADEIVSLIKGGKPITPTPP 447
Y LL S+ A N VYN ++++ W NP R D D+ + KGGK T
Sbjct: 91 YARLLQRQSNGQA-NRVYNGELTS---WANPARGDDDVGTSKKHKRVIAKGGKVRTRRAT 146
Query: 448 VAAPQLPTDEHKEEKAE 498
A + D+ + + E
Sbjct: 147 KDAVETGADDDDDGERE 163
>01_06_1382 - 36856606-36857484,36857962-36858066,36858932-36859546
Length = 532
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -3
Query: 402 YLVRFTAQVAIRTERIIPSALRTNLSVVH-SVIR 304
+L+RF+A A T+RI+P A+ T S+ H S +R
Sbjct: 413 FLLRFSALFAELTDRIVPVAINTKESMFHGSTVR 446
>10_08_1026 +
22400551-22401161,22401437-22401632,22401837-22401889,
22402369-22402819
Length = 436
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 322 NRQISTESGWDNPFRPDGDLSREADEIVSLIK-GGKPITPTPPVAAPQLPTDEHKEEKAE 498
+R + W P P+ + AD + + GG P P PP P +P ++++EE+ E
Sbjct: 91 SRPVLVTDEWGEPGVPEPQSTSAADPPTNDDEWGGDPAPPPPP---PPVPEEDNEEERRE 147
>06_03_1413 + 30004364-30004517,30004603-30005240
Length = 263
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 334 STESGWDNPFRPDGDLSREADEIVSLIKGG 423
S + GW NP RP D+++ A E + + +GG
Sbjct: 122 SDDGGWCNPPRPHFDMAQPAWERIGVYRGG 151
>02_02_0376 + 9551050-9551525,9551966-9552278
Length = 262
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 334 STESGWDNPFRPDGDLSREADEIVSLIKGG 423
S GW NP RP D+++ A E + + +GG
Sbjct: 122 SDSGGWCNPPRPHFDMAQPAWEKIGIYRGG 151
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/84 (26%), Positives = 27/84 (32%)
Frame = +1
Query: 229 SPPPTAEQDSYILYPPLLSTVSDDMADNAVYNRQISTESGWDNPFRPDGDLSREADEIVS 408
+PP AE S L P S S + + V+ R S P R
Sbjct: 335 APPAAAEASSSSLSPSSPSASSPTLGSSPVHLRPPSIPQPRGRAPNPSPPKRRPQPPEPM 394
Query: 409 LIKGGKPITPTPPVAAPQLPTDEH 480
P P PP A P +EH
Sbjct: 395 AAHAWNPFVPMPPQAPPSEEEEEH 418
>04_03_0688 + 18731432-18732466,18733246-18733362
Length = 383
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 382 SREADEIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEA 501
+R+ E V+ ++ +PI P PP AA Q P + + A A
Sbjct: 214 ARKLKEEVAALEEARPIRPPPPSAAAQRPQRQPRRVAAAA 253
>10_08_0153 - 15240707-15241019,15241269-15241723
Length = 255
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 340 ESGWDNPFRPDGDLSREADEIVSLIKGG 423
+ GW NP RP D+S+ A E + + + G
Sbjct: 117 DGGWCNPPRPHFDMSQPAWETIGIYRAG 144
>02_03_0339 - 17909850-17910284
Length = 144
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 311 LSAISSLTVDSRGGYKM*ESCSAVGGGDRHCGR 213
L+A ++ + D RGG + + CS GG R CGR
Sbjct: 45 LAAAAAASGDLRGGRIVAQVCSRGGGHARPCGR 77
>10_08_0924 - 21602510-21603578,21603759-21604275,21604360-21604390
Length = 538
Score = 27.9 bits (59), Expect = 5.2
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = -1
Query: 446 GGVGVMGLPPLMSETISSASRLKSPSGRNGLSHPLSVLICLLYTALSAISSLTVDSRGGY 267
GG G M LP +S R + S R+ ++VL+ L+ +L S+ + R
Sbjct: 31 GGGGEMDLP-------ASRGRWRKRSARSHAPLLVAVLVLLIPASLLLSSAYSSLLRSIL 83
Query: 266 KM*ESCSAVGGGDRHCGRAP 207
GGG R CGR+P
Sbjct: 84 PFSGFGGGGGGGGRRCGRSP 103
>10_08_0825 +
20831170-20831349,20831380-20831547,20831627-20831698,
20831997-20832075,20832182-20832375,20832469-20832558,
20832851-20832940,20833196-20833282,20833477-20833560,
20833690-20833809,20834096-20834103,20834443-20834575,
20835044-20835125,20835330-20835496,20836006-20836493,
20836551-20836638,20836716-20836818,20836932-20837083,
20837191-20837316,20837459-20837529,20837691-20837753,
20838418-20838490,20838972-20839040,20839180-20839257,
20839434-20839484,20839586-20839696
Length = 1008
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
Frame = +1
Query: 376 DLSREADEIVSLIKGGK-----PITPTPPVAAPQLP 468
DLSR ++++S ++ + P TP PP + P++P
Sbjct: 2 DLSRVGEKLLSSVRSARSLGLLPPTPPPPASRPEVP 37
>08_01_0621 - 5426210-5427787
Length = 525
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 436 PTPPVAAPQLPTDEHKEEKAEANNV 510
P+PP+AAP P EEKAE V
Sbjct: 54 PSPPLAAPYWPRGFADEEKAEKEAV 78
>07_01_0862 - 7172083-7172931
Length = 282
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 232 PPPTAEQDSYILYPPLL 282
PPPTAE+ +L+PP L
Sbjct: 134 PPPTAEEKKLLLFPPPL 150
>06_03_1223 -
28526869-28527192,28527515-28527634,28527742-28527816,
28527905-28527964,28528271-28528370,28528664-28529148,
28529243-28529437,28529532-28529762,28529851-28529967,
28530247-28530330,28530755-28530893,28530939-28531090
Length = 693
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 344 LSVLICLLYTALSAISSLTVDSRGG--YKM*ESCSAVGGGDRHCG 216
LSV CL+Y L + V SRGG ++ GGG R G
Sbjct: 29 LSVSCCLIYLLLMDVCCWPVSSRGGSIQRVMRRIGGGGGGRRSAG 73
>03_05_1048 - 29950860-29951396,29951810-29952676
Length = 467
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 402 YLVRFTAQVAIRTERIIPSALRTNLSVVH 316
+L+RF+A A T+ I+P A+ +S+ H
Sbjct: 338 FLLRFSALFAELTDEIVPVAMENQMSMFH 366
>03_01_0260 -
1999462-1999488,1999748-1999930,2000940-2001146,
2001895-2002359
Length = 293
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 364 RPDGDLSREADEIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNVN 513
R D+ RE +E + + + TPP +AP P D K +K + V+
Sbjct: 128 RKAADVKRELEEFFAAKQSAS--SSTPPASAPGAPQDAPKTDKGKILKVS 175
>01_05_0519 - 22897277-22897986,22898126-22898225
Length = 269
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 358 PFRPDGDLSREADEIVSLIKGGKPITPTPPVAAPQLPT--DEH-KEEKAEANN 507
P + D D S ++ + K +P T P AAP P + H +EEKA A +
Sbjct: 130 PPKTDSDQSERRTQLSAREKKEEPPKATAPAAAPPQPAARERHDEEEKARAEH 182
>10_03_0002 - 6858257-6861205
Length = 982
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 187 VRVSFYQGARPQCLSPPPTAEQDSYILYPPLLSTVSDDMA 306
+ + F + S P T +QD YPP+L + DD+A
Sbjct: 65 ISIEFASNHSGEIASSPTTPDQDDGA-YPPILMKLPDDLA 103
>07_01_0042 -
334417-334431,334563-334688,334852-335136,335220-335368,
336239-336536,337030-337131,337245-337613,337973-338115,
338334-338518,339246-339475,339734-339821,340158-340253,
340397-340512,340604-340852,340950-341175,341411-341622
Length = 962
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 103 IYN*CTVSRIKCSVIFCDCAFLSSERSKVRVSFYQGARPQCLS 231
I+ CTV I C V + C L+ +SK SF + + P L+
Sbjct: 141 IFQNCTVISIACCVFYSHCGNLAVHKSK---SFSRNSDPNLLA 180
>02_03_0377 + 18319288-18319527,18319936-18320331
Length = 211
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 355 NPFRPDGDLSREADEIVSLIKGGKPIT---PTPPVAAPQLPTDE 477
NPF+ GDL + SL GGKP+ P PPV P + ++
Sbjct: 158 NPFKSLGDLIKS-----SLKGGGKPMIEAPPLPPVGVPDVTRND 196
>01_06_0243 + 27833497-27834042,27834144-27834238,27834400-27835567
Length = 602
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 304 ADNAVYNRQISTESGWDNPFRPDGDLSREADEIVSLIKGGKPITPTPPVAAP 459
+++ Y + G P G L RE E+ + GG ++ PP +AP
Sbjct: 35 SESDYYRNAFQGKQGQAVPLPRGGGLRREQQELGAAGPGGSGLSKAPPRSAP 86
>11_01_0241 - 1858391-1859143,1859577-1859819
Length = 331
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -1
Query: 461 CGAATGGVGVMGLPPLMSETISSASRLKSPSGRNGL 354
CG GG+G G PL + + L SP G+
Sbjct: 244 CGNGHGGIGTQGQTPLAMQNTNGEMTLFSPMNGYGV 279
>07_03_1180 -
24601631-24602142,24602518-24602581,24602811-24602876,
24602949-24603070,24603170-24603344,24603466-24603701,
24603781-24604129,24605009-24605146,24605242-24605289
Length = 569
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 406 SLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNV 510
S++K K TPTPPVA P+ P + K +NV
Sbjct: 256 SVVKVTKEGTPTPPVAKPK-PKPKPKPTAKVTDNV 289
>05_05_0047 + 21860127-21860735,21862600-21863451
Length = 486
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -3
Query: 402 YLVRFTAQVAIRTERIIPSALRTNLSVVH 316
+L+RF++ A T+RI+P A+ T ++ H
Sbjct: 387 FLLRFSSLFAELTDRIVPVAIATRETMFH 415
>03_01_0383 + 2980693-2980816,2980908-2981226,2981315-2981624
Length = 250
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 334 STESGWDNPFRPDGDLSREADEIVSLIKGG 423
S + GW NP R D+++ A E + + +GG
Sbjct: 111 SNDGGWCNPPRQHFDMAQPAWEQIGVYRGG 140
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,815,129
Number of Sequences: 37544
Number of extensions: 329789
Number of successful extensions: 1325
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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