Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326F10f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    26   0.88 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   1.5  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   4.7  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   8.2  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 205 ENNSGFIFHLISPVRYA 255
           ++NSGFIFHL  P+ ++
Sbjct: 800 KSNSGFIFHLGGPISWS 816


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = -2

Query: 319 CTKLIHSIE*ARKCLLD*NELMHSEREILDGK*SLNYFRTSVFQTVKKKSHR 164
           C+K    +  A+  +LD N+  +  R +LD    LN+    V Q ++ K  R
Sbjct: 433 CSKKTVILSTAQIIILDVNDQPYKVRALLDNGSQLNFITERVAQELRLKRAR 484


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 67  VLRCCLW-MIRCFDAFNRLRYYVCKIEMLPWL 159
           VL C +  ++ C  A   L YY  K+E+  WL
Sbjct: 845 VLTCVIVSVVACLVAALSLVYYTYKLELKVWL 876


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/38 (28%), Positives = 14/38 (36%)
 Frame = +1

Query: 85  WMIRCFDAFNRLRYYVCKIEMLPWLIFDATFSLQSGKH 198
           W I         RYY C  E    + ++ T   QS  H
Sbjct: 209 WKIAKISVERNTRYYPCCTEPYIDITYNVTLQRQSDTH 246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,295
Number of Sequences: 2352
Number of extensions: 8393
Number of successful extensions: 53
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)