Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326F08f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    35   0.002
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            35   0.002
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.22 
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   3.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   3.6  
AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450 pr...    23   4.7  

>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 34.7 bits (76), Expect = 0.002
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +3

Query: 300 DPVKAEQEKELGNEYFKKGDYSTAVKHYTEAIKRNPDDSKLYSNRAACYTKLAAFDLGLK 479
           D    E  K+ G+ +F++ ++  A+  Y+  I+   D   L+ NR+A +  L  +    +
Sbjct: 279 DERNPEWLKQRGDTFFQQRNFLAAISAYSAGIRLTKDYYALFLNRSAAHLALENYQRCAE 338

Query: 480 DCEQCCKL 503
           DC    +L
Sbjct: 339 DCSTALEL 346


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 34.7 bits (76), Expect = 0.002
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +3

Query: 300 DPVKAEQEKELGNEYFKKGDYSTAVKHYTEAIKRNPDDSKLYSNRAACYTKLAAFDLGLK 479
           D    E  K+ G+ +F++ ++  A+  Y+  I+   D   L+ NR+A +  L  +    +
Sbjct: 279 DERNPEWLKQRGDTFFQQRNFLAAISAYSAGIRLTKDYYALFLNRSAAHLALENYQRCAE 338

Query: 480 DCEQCCKL 503
           DC    +L
Sbjct: 339 DCSTALEL 346


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 27.9 bits (59), Expect = 0.22
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +3

Query: 345 FKKGDYSTAVKHYTEAIKRNPD-DSKLYSNRAACYTKLAAFDLGLKDCEQCCKLDPKFI 518
           F K DY  A+  Y +A++ NP+  + +      C+ KL+  D      ++   L+P+ +
Sbjct: 173 FNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFLKLSNPDKAKLAFQRALDLEPQCV 231



 Score = 23.8 bits (49), Expect = 3.6
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 330 LGNEYFKKGDYSTAVKHYTEAIKRNPDDSKLYSNRAACYTKLAAFDL 470
           L   YF+ G    A     +A +  P D+ L  N A    +LA F L
Sbjct: 722 LARAYFRAGKLKEAKMTLLKARRVAPQDTVLLFNIALVLQRLATFVL 768


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 390 AIKRNPDDSKLYSNRAACYTKLAAFDLGLKDCEQCC 497
           A+  NPD  +LY +  + Y KL    +   D  + C
Sbjct: 21  AVAGNPDAKRLYDDLLSNYNKLVRPVVNTSDVLRVC 56


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 390 AIKRNPDDSKLYSNRAACYTKLAAFDLGLKDCEQCC 497
           A+  NPD  +LY +  + Y KL    +   D  + C
Sbjct: 21  AVAGNPDAKRLYDDLLSNYNKLVRPVVNTSDVLRVC 56


>AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 73  LMHFSYSFCSKKTAAIFV 20
           LMHFS++ CSK    + +
Sbjct: 462 LMHFSFARCSKTNVPLVI 479


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,261
Number of Sequences: 2352
Number of extensions: 7015
Number of successful extensions: 57
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)