Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326F07f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809...    31   0.74 
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517...    31   0.74 
01_06_1684 + 39151412-39151702,39152410-39152548,39152926-391530...    29   3.0  
04_01_0572 + 7404842-7405502,7405581-7406143,7406338-7406479,740...    28   4.0  
09_02_0379 - 8210401-8210567,8210944-8213827                           28   5.2  
02_04_0369 + 22420876-22421118                                         27   9.1  

>11_02_0082 -
           8088169-8088284,8088613-8088697,8090344-8090442,
           8090537-8090609,8090694-8090804,8090901-8091074,
           8091184-8091574,8091662-8092283,8092379-8093251,
           8093294-8093800
          Length = 1016

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 337 TDYWNSEVAHGIPNEYNFTEGNV 405
           + YWN E  + +PN+Y   EGNV
Sbjct: 19  SQYWNEEEGNEVPNQYLNEEGNV 41


>01_03_0280 -
           14546334-14546815,14546894-14547560,14550333-14551754,
           14552831-14553127
          Length = 955

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +1

Query: 238 EDIDXNQAKLSKDEIIDEMAXKYKDE--WDKLSD-VTDYWNSEVAHGIPNEYNFTEGNV 405
           E  + N+ K +    +  MA + +++  +D +++  + YWN E  +  PN+Y   EGNV
Sbjct: 82  EGTNVNENKRTNVNELGNMADRDEEQILYDTIAEGSSQYWNEEEGNEDPNQYLNEEGNV 140


>01_06_1684 +
           39151412-39151702,39152410-39152548,39152926-39153040,
           39153232-39153332,39153688-39153809,39153885-39153976,
           39155288-39155393,39155477-39155631,39155904-39156031,
           39156349-39156479,39157171-39157268,39157371-39158162,
           39158472-39158523
          Length = 773

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +1

Query: 73  PKTLVQNYGAMTTSDNDVQKKATEYVKSNQNDDELGYNQFMSFMKRIXSGEMK-FGEDID 249
           PK  V  YGA    D  + +  +++V S  ++DE      M+ + R+ +  ++   +D  
Sbjct: 466 PKLHVYAYGAAPCVDYVIAEACSQFVTSIVHNDEFSARLSMNSIIRLRAAAVRALSKDAL 525

Query: 250 XNQAKLSK 273
            N AK+ K
Sbjct: 526 PNSAKVGK 533


>04_01_0572 +
           7404842-7405502,7405581-7406143,7406338-7406479,
           7406605-7407436,7407546-7407729
          Length = 793

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 337 TDYWNSEVAHGIPNEYNFTEGNV 405
           + YWN E  +  PN+Y   EGNV
Sbjct: 19  SQYWNEEEGNEDPNQYLNEEGNV 41


>09_02_0379 - 8210401-8210567,8210944-8213827
          Length = 1016

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = +1

Query: 121 DVQKKATEYVKSNQNDDELGYNQFMSFMKRIXSGEMKFGEDI 246
           D++  + EYV  +  +  + Y ++++F +     ++ FGED+
Sbjct: 721 DIETLSIEYVDDSYPEKAIPYLEYLTFWRLPKLSKVSFGEDL 762


>02_04_0369 + 22420876-22421118
          Length = 80

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 88  QNYGAMTTSDNDVQKKATEYVKS 156
           ++YGA    + DV +KA++Y+ S
Sbjct: 48  EDYGAWWVGERDVDRKASDYINS 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.312    0.128    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,887,144
Number of Sequences: 37544
Number of extensions: 181446
Number of successful extensions: 298
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)