Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326F07f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13592-1|CAA73920.1|  136|Anopheles gambiae voltage-gated sodium...    25   1.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   2.7  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   2.7  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   2.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   2.7  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   6.2  

>Y13592-1|CAA73920.1|  136|Anopheles gambiae voltage-gated sodium
           channel protein.
          Length = 136

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +1

Query: 16  IPFMMHQTRIGHSQSLSMVPKTLVQNYGAMT----TSDNDVQKKA 138
           IPF +    IG+   L++    L+ N+G+ +    T+DND  K A
Sbjct: 92  IPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNKIA 136


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 16   IPFMMHQTRIGHSQSLSMVPKTLVQNYGAMT----TSDNDVQKKATEY 147
            IPF +    IG+   L++    L+ N+G+ +    T+DN+  K A  +
Sbjct: 1007 IPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNETNKIAEAF 1054


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 24  YDASN*NWPLSISFNGSKNFSAKLWSNDN 110
           +D S+  WP     +   N+   LW ND+
Sbjct: 616 WDCSDDGWPQGFWNDNDNNWLRGLWDNDD 644


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
 Frame = +1

Query: 325 LSDVTDYWNSEVAHGI----PNEYNF 390
           L D+ DYW   V HG     P ++N+
Sbjct: 59  LPDLEDYWTGIVTHGYLVIRPKDHNY 84


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
 Frame = +1

Query: 325 LSDVTDYWNSEVAHGI----PNEYNF 390
           L D+ DYW   V HG     P ++N+
Sbjct: 59  LPDLEDYWTGIVTHGYLVIRPKDHNY 84


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 349 NSEVAHGIPNEYNFTEG 399
           N E +H  PN+Y F  G
Sbjct: 537 NGETSHLSPNQYGFRRG 553


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.128    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,970
Number of Sequences: 2352
Number of extensions: 7740
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)