Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326F07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF039042-12|AAC48249.1| 352|Caenorhabditis elegans Hypothetical... 29 2.7
AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical ... 28 3.5
Z73972-8|CAI46601.1| 320|Caenorhabditis elegans Hypothetical pr... 28 4.7
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 28 4.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 4.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 4.7
AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical ... 28 4.7
Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF036705-3|AAB95171.1| 556|Caenorhabditis elegans Hypothetical ... 27 6.2
Z82069-2|CAB04904.1| 315|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z73898-6|CAA98067.2| 168|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 73 PKTLVQNYGAMTTSDNDVQKKATEYVKSNQNDDELGYNQF 192
P+T Y A T DND K +E++KS + DE + +F
Sbjct: 100 PETSRDLYEAFTEGDNDAVDKISEWLKSEK--DESSWKKF 137
>AF039042-12|AAC48249.1| 352|Caenorhabditis elegans Hypothetical
protein ZK697.1 protein.
Length = 352
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -3
Query: 249 INIFTKFHFTRXNSFHK*HKLIVTKFIIILIAFDILGCLFLHIIVRSCHCSIILH 85
IN+FT+ R +++ L + FI I I F + GC+ + + +ILH
Sbjct: 138 INLFTRLIADRESNYSLAAMLTIALFIYISIGF-VFGCIISFTFLATMQRILILH 191
>AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical
protein F52G3.4 protein.
Length = 1009
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +1
Query: 94 YGAMTTSDNDVQKKATEYVKSNQNDDELGYNQFMSFMKRIXSGEMKFGEDIDXNQAKLSK 273
Y +T Q+K + + +Q+ D N+ S E + D D ++ S+
Sbjct: 493 YSNITELLRSQQEKKSAEQQEDQDVDMEEDNEDASAEPIQNESENEMVSDEDDKKSSNSQ 552
Query: 274 DEIIDEMAXKYKDEWDKLSD 333
++ D+M Y+DE KL D
Sbjct: 553 SDVDDQMLHDYEDEEGKLED 572
>Z73972-8|CAI46601.1| 320|Caenorhabditis elegans Hypothetical
protein F15H10.9 protein.
Length = 320
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 265 LSKDEIIDEMAXKYKDEWDKLSDVTDYWNSEVAHGIPNEYNFTEGNVMLENKSALEI 435
+ K E IDE+ K W++ V DY+ SE + +E T +++ + E+
Sbjct: 105 IEKIEKIDEIVEFIKSLWNRADQVIDYFKSEKMEWLIDETFRTSIQLLMSGEKIPEM 161
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +1
Query: 202 MKRIXSGEMKFGEDIDXNQAKLSKDEIIDEMAXKYKDEWDKLSDVTDYWNSEVAHGIPNE 381
+K + K ++ D ++ ++EI DE + +Y+DE +YW+ E+ + E
Sbjct: 801 LKLVDRAARKDSDETDESEYYDDEEEIEDE-SDEYEDE--------EYWDEEIEYEDEEE 851
Query: 382 YNFTEGNVMLE 414
Y + + V+ E
Sbjct: 852 YEYEDEEVLEE 862
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 4.7
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Frame = +1
Query: 34 QTRIGHSQSLSMVPKTLVQNYGAMTTSDNDVQKKATEYVKSNQNDDELGYNQFMSFMKRI 213
Q+++ S SLS K + + SD D QK T + +++ + +GY + S +
Sbjct: 11438 QSKVKDSDSLSSTDKKI-----GLKKSDKD-QKLGTSKIFGSKDQESVGYEEKTSNFSKQ 11491
Query: 214 XSGEMKFGEDIDXNQAKLSKDEIIDEMAXKYKDEWDKLSDV----TDYWNSEVAHGIPNE 381
G G D +Q + + + + A + + ++ T S+ A G +E
Sbjct: 11492 RRGVSDLGSDAMTDQKNVQESQYAEISADDHMSKTGADGEISATRTIVDGSDAAQG--SE 11549
Query: 382 YNFTEGNVMLENKSALEIGKEKLKLXD 462
Y E + + K A +IG+ + L D
Sbjct: 11550 Y--AEISKKRKFKRAEQIGEAETSLCD 11574
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 4.7
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Frame = +1
Query: 34 QTRIGHSQSLSMVPKTLVQNYGAMTTSDNDVQKKATEYVKSNQNDDELGYNQFMSFMKRI 213
Q+++ S SLS K + + SD D QK T + +++ + +GY + S +
Sbjct: 11438 QSKVKDSDSLSSTDKKI-----GLKKSDKD-QKLGTSKIFGSKDQESVGYEEKTSNFSKQ 11491
Query: 214 XSGEMKFGEDIDXNQAKLSKDEIIDEMAXKYKDEWDKLSDV----TDYWNSEVAHGIPNE 381
G G D +Q + + + + A + + ++ T S+ A G +E
Sbjct: 11492 RRGVSDLGSDAMTDQKNVQESQYAEISADDHMSKTGADGEISATRTIVDGSDAAQG--SE 11549
Query: 382 YNFTEGNVMLENKSALEIGKEKLKLXD 462
Y E + + K A +IG+ + L D
Sbjct: 11550 Y--AEISKKRKFKRAEQIGEAETSLCD 11574
>AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical
protein Y102A11A.3 protein.
Length = 1571
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +1
Query: 79 TLVQNYGAMTTSDNDVQKKATEYVKSNQNDDELGYNQFMSFMKRIXSGEMKFGEDIDXNQ 258
++ ++ T+DND+Q ++ D E+G N F++++ + G D Q
Sbjct: 963 SVTSSFSTSNTNDNDLQSCVPLSIEETW-DIEVGLNHFLNWLHGLSENSSDAGPTEDFPQ 1021
Query: 259 AKLSKD 276
+S D
Sbjct: 1022 NTISLD 1027
>Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical
protein Y57G11A.3 protein.
Length = 298
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/62 (19%), Positives = 29/62 (46%)
Frame = +1
Query: 97 GAMTTSDNDVQKKATEYVKSNQNDDELGYNQFMSFMKRIXSGEMKFGEDIDXNQAKLSKD 276
GA+ +N+ + ++ Q E+G +F F + + + ED++ ++ K+
Sbjct: 76 GAVHNIENEDDETKIARLEERQKLTEIGQEKFSKFKTKFENIDSTMDEDLEQKLKRMQKE 135
Query: 277 EI 282
+I
Sbjct: 136 QI 137
>AF036705-3|AAB95171.1| 556|Caenorhabditis elegans Hypothetical
protein F37C4.5a protein.
Length = 556
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 79 TLVQNYGAMTTSDNDVQKKATEYVKSNQNDDELGY 183
T V + T D D++K EY +++Q+ D GY
Sbjct: 157 TTVDLRAQIRTLDQDLRKAEEEYARASQDYDNTGY 191
>Z82069-2|CAB04904.1| 315|Caenorhabditis elegans Hypothetical
protein W04A8.3 protein.
Length = 315
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 307 KDEWDKLSDVTDYWNSEVA---HGIPNEYNFTEGNV 405
K E+ + +TDYWN ++ HG ++ FT+ N+
Sbjct: 265 KPEYKFMMRITDYWNEDIVIWKHGF--KFTFTDRNL 298
>Z73898-6|CAA98067.2| 168|Caenorhabditis elegans Hypothetical
protein ZK822.2 protein.
Length = 168
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 115 DNDVQKKATEYVKSNQNDDELGYNQFMSFMKRIXSGEMKFGE-DIDXNQAKLSKDEIIDE 291
DN++ ++ E+ K+ E + R+ + +++ + + D + K+ +DE IDE
Sbjct: 69 DNNLSEQYAEFSKNMTIHKEEVSKNISGVIDRLAAAKVEVDKVNADLSLTKIQRDEKIDE 128
Query: 292 MAXKYKDE 315
+ Y E
Sbjct: 129 LKKTYPQE 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.128 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,952,826
Number of Sequences: 27780
Number of extensions: 182332
Number of successful extensions: 404
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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