Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326F07f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   2.5  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   3.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.4  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   5.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   5.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   5.8  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 370 IPNEYNFTEGNVMLENKSALE 432
           +P E    EGN+M+ NK AL+
Sbjct: 865 VPEELVPLEGNLMINNKYALK 885


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +1

Query: 325 LSDVTDYWNSEVAHGIPNEYNFTEGNVMLENKSALEIGKEKLKLXDIPGAVLCFEAACQQ 504
           + D  DYWN  + +    E + T    M  +   + +   +LK+  I G  +  +A+ Q 
Sbjct: 524 VEDSDDYWNCVIQYNTRAENHQTGTAKMGPSYDPMAVVSPRLKVHGIRGLRVA-DASVQP 582

Query: 505 QPAS 516
           Q  S
Sbjct: 583 QVIS 586


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 464 FQELFFVLKQLVNNNQPL 517
           F  L+ +   LVNNNQP+
Sbjct: 138 FDRLWVLDSGLVNNNQPM 155


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 112 SDNDVQKKATEYVKSNQNDDE 174
           SDN+  K   E+  S+ +DDE
Sbjct: 93  SDNENIKSQKEFPNSSSSDDE 113


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 10  RTIPFMMHQTRIGHSQSLSMVPKTLV 87
           R + F   + +IGH    +  P TLV
Sbjct: 188 RLVVFFRFERQIGHHLIQTFAPSTLV 213


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/42 (23%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +1

Query: 355 EVAHGIPNEYN--FTEGNVMLENKSALEIGKEKLKLXDIPGA 474
           E+   IP +    + +GNV+ E ++ + IG++ +++  + G+
Sbjct: 787 EIPRRIPMDATEVYLDGNVLRELQNHVFIGRKNMRVLYVNGS 828


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 340 DYWNSEVAHGIPN 378
           D+W S V +G+PN
Sbjct: 494 DFWVSFVNNGVPN 506


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 340 DYWNSEVAHGIPN 378
           D+W S V +G+PN
Sbjct: 494 DFWVSFVNNGVPN 506


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.312    0.128    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,298
Number of Sequences: 438
Number of extensions: 2472
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)