Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326F06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   1.6  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   5.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   5.0  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 326 FHKLLYKSIHNLCFAFPHSILS 261
           FH L  + +H LC  F H  +S
Sbjct: 156 FHLLELEKVHELCDNFCHRYIS 177


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 35  LLIFGKMSPKIILLFSGKRKSGKDFLTDHL 124
           +++ G +     LLF   RKS  ++   HL
Sbjct: 37  IIVAGNVGVLYTLLFGRSRKSRMNYFITHL 66


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 74  LFSGKRKSGKDFLTDHLRHILADK 145
           LF GKR +  D L  HLR    +K
Sbjct: 350 LFCGKRFTRSDELQRHLRTHTGEK 373


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 32  FLLIFGKMSPKIILLFSGKRKSGKDF 109
           F+L F  +S +IIL+FS K K  K F
Sbjct: 68  FMLTFFNVSLRIILVFS-KGKVIKSF 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,401
Number of Sequences: 336
Number of extensions: 2437
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)