Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326F06f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773...    27   9.1  
07_03_1484 - 26888501-26889049                                         27   9.1  

>12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,
            7731873-7732106,7732362-7732495,7734116-7734199,
            7735086-7735376,7735566-7735898,7736351-7736424,
            7736558-7736653,7736876-7737029,7737118-7737221,
            7737325-7737485,7737774-7738087,7738950-7739231,
            7739909-7740210,7740513-7740713,7740924-7741014,
            7741424-7741500,7741595-7741754,7742026-7742110,
            7742194-7742288
          Length = 1322

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 325  FTSCFTKASIIFVSHFLTPFYHLQSVLFLIFT 230
            F +C  K    F+SH+ TP Y+L  ++F+ F+
Sbjct: 1046 FKACLWKQ---FLSHWRTPSYNLVRIVFMAFS 1074


>07_03_1484 - 26888501-26889049
          Length = 182

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 376 CLTSNVTYNPHRFNGSIFTSCFTKASIIFVS 284
           CLTS++      F+G+I  S F K S++ V+
Sbjct: 93  CLTSDLNKEMRLFDGAIVESRFLKRSVVAVN 123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,401,341
Number of Sequences: 37544
Number of extensions: 223838
Number of successful extensions: 505
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)