Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326F02f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.31 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   0.71 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   6.6  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 520 RNFYVLLLQLVMRVCTFAHLR*IQAFRLIYDVPQXDV 410
           RN YV LLQLV   C F +L     + + Y V +  +
Sbjct: 134 RNDYVSLLQLVFVFCYFIYL--FTVYYIYYSVHEASI 168


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 9/38 (23%), Positives = 16/38 (42%)
 Frame = +3

Query: 228 VPPXETRDPQPSEATPTVAPXSXXEQAPSSTETPPXPQ 341
           +PP     P+P     T +  +   + P+ + T   PQ
Sbjct: 391 IPPEPVPTPEPQPTQTTESEPTQASEQPTESSTTQKPQ 428


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -1

Query: 356 RFQSSLRXRWCFG--GRRSLFXX--TXRCYCWGSF 264
           + ++S+   +CFG   ++ +F    T + YCW SF
Sbjct: 520 KVETSICKNFCFGFITKQLIFMIFVTYQLYCWSSF 554


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 255 QPSEATPTVAPXSXXEQAPSSTETPPXPQ 341
           QP +      P     Q+PSST + P P+
Sbjct: 267 QPLDLYNFRVPQHQVLQSPSSTSSSPEPR 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,575
Number of Sequences: 336
Number of extensions: 1771
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)