Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326F02f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    29   0.095
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           23   8.2  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           23   8.2  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 29.1 bits (62), Expect = 0.095
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 231 PPXETRDPQPSEATPTVAPXSXXEQAPSSTETP 329
           PP      Q SE TP + P +  +  PSS + P
Sbjct: 644 PPRTNSQSQASEPTPALPPRADRDSKPSSRDRP 676


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 231 PPXETRDPQPSEATPT---VAPXSXXEQAPSSTET 326
           PP  T  P  +   PT   VAP +    AP++T T
Sbjct: 24  PPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTT 58


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 231 PPXETRDPQPSEATPT---VAPXSXXEQAPSSTET 326
           PP  T  P  +   PT   VAP +    AP++T T
Sbjct: 24  PPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTT 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,709
Number of Sequences: 2352
Number of extensions: 7440
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)