Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326E12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   3.3  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   4.4  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   4.4  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   4.4  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   4.4  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   4.4  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   4.4  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   5.8  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   7.7  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   7.7  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   7.7  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   7.7  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   7.7  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 229 LLDNETDIDLLDTFDS*LRQC 167
           L D + D+DL D+    +RQC
Sbjct: 81  LNDTDMDMDLKDSIRKIIRQC 101


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 387 IHRNKYTHNRNKHKY 343
           IH N Y +N N + Y
Sbjct: 89  IHNNNYKYNYNNNNY 103


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 387 IHRNKYTHNRNKHKY 343
           IH N Y +N N + Y
Sbjct: 89  IHNNNYKYNYNNNNY 103


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 387 IHRNKYTHNRNKHKY 343
           IH N Y +N N + Y
Sbjct: 90  IHNNNYKYNYNNNNY 104


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 387 IHRNKYTHNRNKHKY 343
           IH N Y +N N + Y
Sbjct: 90  IHNNNYKYNYNNNNY 104


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 387 IHRNKYTHNRNKHKY 343
           IH N Y +N N + Y
Sbjct: 90  IHNNNYKYNYNNNNY 104


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 387 IHRNKYTHNRNKHKY 343
           IH N Y +N N + Y
Sbjct: 90  IHNNNYKYNYNNNNY 104


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
 Frame = -3

Query: 378 NKYTHNRNKHKY-YVFKSGVQHGTSNTK 298
           NK  HN N +KY Y  K    +   N K
Sbjct: 87  NKTIHNNNNYKYNYNNKYNYNNNNYNKK 114


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 378 NKYTHNRNKHKY 343
           NK  HN N +KY
Sbjct: 87  NKTIHNNNNYKY 98


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 378 NKYTHNRNKHKY 343
           NK  HN N +KY
Sbjct: 87  NKTIHNNNNYKY 98


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 378 NKYTHNRNKHKY 343
           NK  HN N +KY
Sbjct: 87  NKTIHNNNNYKY 98


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 378 NKYTHNRNKHKY 343
           NK  HN N +KY
Sbjct: 87  NKTIHNNNNYKY 98


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 378 NKYTHNRNKHKY 343
           NK  HN N +KY
Sbjct: 320 NKTIHNNNNYKY 331


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,000
Number of Sequences: 438
Number of extensions: 2391
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)