Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326E10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U11280-3|AAM97952.1|  403|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U11280-2|AAK77637.1|  452|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U11280-1|AAA19436.1|  450|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z92973-2|CAB07492.2|  964|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>U11280-3|AAM97952.1|  403|Caenorhabditis elegans Hypothetical
           protein T17E9.2c protein.
          Length = 403

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 336 HTVHTTAYRLYIYHYIA 286
           HT H T Y  Y+Y+Y+A
Sbjct: 317 HTTHKTIYAAYLYYYVA 333


>U11280-2|AAK77637.1|  452|Caenorhabditis elegans Hypothetical
           protein T17E9.2b protein.
          Length = 452

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 336 HTVHTTAYRLYIYHYIA 286
           HT H T Y  Y+Y+Y+A
Sbjct: 366 HTTHKTIYAAYLYYYVA 382


>U11280-1|AAA19436.1|  450|Caenorhabditis elegans Hypothetical
           protein T17E9.2a protein.
          Length = 450

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 336 HTVHTTAYRLYIYHYIA 286
           HT H T Y  Y+Y+Y+A
Sbjct: 364 HTTHKTIYAAYLYYYVA 380


>U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical
           protein F42C5.4 protein.
          Length = 712

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -2

Query: 451 YTLRSI--HYRYPSSV*RERWLNAGSSGRESQSIAHGDASPHRTHYCI 314
           Y  R I  H++   ++  E+W N+ ++G E+ S  H DA   R  +C+
Sbjct: 82  YQARKIVEHFKENPTMIIEKWWNSTANGSETCSHCHNDAKKPR--FCV 127


>Z92973-2|CAB07492.2|  964|Caenorhabditis elegans Hypothetical
           protein Y6G8.2 protein.
          Length = 964

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 66  QHFLIPIENLKFIIMFCPIYTR 1
           QHF +PIE L+F    CP  TR
Sbjct: 35  QHFRLPIEYLQFYHSKCPNKTR 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,677,778
Number of Sequences: 27780
Number of extensions: 235013
Number of successful extensions: 546
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)