Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326E07f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.47 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   3.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   3.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   3.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   5.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 11/54 (20%), Positives = 28/54 (51%)
 Frame = -1

Query: 167 RLQKMELCRQHMGQLQHSVLQLRKELRSAQQQQVRELLVRSHNERR*EPVQQRP 6
           ++Q  +  +Q   Q QH +   + + +  QQQQ ++   +   +++  P+++ P
Sbjct: 417 QMQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQQHWPMEEEP 470


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 364 CWIPLPLNKIKFPTTPQFTPKD 429
           CW+P  L  +  P  P   P D
Sbjct: 339 CWLPFFLMYVIVPFCPDCCPSD 360



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 4/10 (40%), Positives = 7/10 (70%)
 Frame = -2

Query: 136 IWASCSIACC 107
           +W +C + CC
Sbjct: 111 LWLTCDVLCC 120


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 364 CWIPLPLNKIKFPTTPQFTPKD 429
           CW+P  L  +  P  P   P D
Sbjct: 339 CWLPFFLMYVIVPFCPDCCPSD 360



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 4/10 (40%), Positives = 7/10 (70%)
 Frame = -2

Query: 136 IWASCSIACC 107
           +W +C + CC
Sbjct: 111 LWLTCDVLCC 120


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 364 CWIPLPLNKIKFPTTPQFTPKD 429
           CW+P  L  +  P  P   P D
Sbjct: 339 CWLPFFLMYVIVPFCPDCCPSD 360



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 4/10 (40%), Positives = 7/10 (70%)
 Frame = -2

Query: 136 IWASCSIACC 107
           +W +C + CC
Sbjct: 111 LWLTCDVLCC 120


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 140 QHMGQLQHSVLQLRKELRSAQQQQ 69
           QH  Q Q   LQ  ++    QQQQ
Sbjct: 185 QHQSQAQQQHLQAHEQHMMYQQQQ 208


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,451
Number of Sequences: 438
Number of extensions: 1894
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)