Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326E06f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   305   2e-83
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   305   2e-83
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   305   2e-83
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   305   2e-83
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   305   2e-83
BT025914-1|ABG02158.1|  196|Drosophila melanogaster IP08472p pro...    28   8.8  
BT016040-1|AAV36925.1|  671|Drosophila melanogaster LP22276p pro...    28   8.8  
BT009971-1|AAQ22440.1|  784|Drosophila melanogaster RE64209p pro...    28   8.8  
AY122202-1|AAM52714.1|  585|Drosophila melanogaster LD47517p pro...    28   8.8  
AE014297-1164|AAF54536.2|  784|Drosophila melanogaster CG14681-P...    28   8.8  
AE014297-323|AAN13256.1|  639|Drosophila melanogaster CG2182-PB,...    28   8.8  
AE014297-322|AAF51975.3|  671|Drosophila melanogaster CG2182-PA,...    28   8.8  

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  305 bits (750), Expect = 2e-83
 Identities = 140/158 (88%), Positives = 148/158 (93%)
 Frame = -2

Query: 520 KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNN 341
           KTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNN
Sbjct: 254 KTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNN 313

Query: 340 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEK 161
           ASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+
Sbjct: 314 ASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQ 373

Query: 160 INLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 47
           I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 374 IKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  305 bits (750), Expect = 2e-83
 Identities = 140/158 (88%), Positives = 148/158 (93%)
 Frame = -2

Query: 520 KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNN 341
           KTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNN
Sbjct: 243 KTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNN 302

Query: 340 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEK 161
           ASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+
Sbjct: 303 ASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQ 362

Query: 160 INLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 47
           I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 363 IKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  305 bits (750), Expect = 2e-83
 Identities = 140/158 (88%), Positives = 148/158 (93%)
 Frame = -2

Query: 520 KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNN 341
           KTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNN
Sbjct: 230 KTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNN 289

Query: 340 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEK 161
           ASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+
Sbjct: 290 ASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQ 349

Query: 160 INLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 47
           I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 350 IKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  305 bits (750), Expect = 2e-83
 Identities = 140/158 (88%), Positives = 148/158 (93%)
 Frame = -2

Query: 520 KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNN 341
           KTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNN
Sbjct: 230 KTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNN 289

Query: 340 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEK 161
           ASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+
Sbjct: 290 ASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQ 349

Query: 160 INLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 47
           I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 350 IKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  305 bits (750), Expect = 2e-83
 Identities = 140/158 (88%), Positives = 148/158 (93%)
 Frame = -2

Query: 520 KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNN 341
           KTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNN
Sbjct: 243 KTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNN 302

Query: 340 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEK 161
           ASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+
Sbjct: 303 ASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQ 362

Query: 160 INLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 47
           I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 363 IKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400


>BT025914-1|ABG02158.1|  196|Drosophila melanogaster IP08472p
           protein.
          Length = 196

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 170 CSP-LCMHTQRLSKSNDTLFRSHAATLDH 253
           CS  LC H      S+D LF SH + LDH
Sbjct: 88  CSDGLCNHDVHDEDSDDLLFYSHQSQLDH 116


>BT016040-1|AAV36925.1|  671|Drosophila melanogaster LP22276p
           protein.
          Length = 671

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 170 CSP-LCMHTQRLSKSNDTLFRSHAATLDH 253
           CS  LC H      S+D LF SH + LDH
Sbjct: 563 CSDGLCNHDVHDEDSDDLLFYSHQSQLDH 591


>BT009971-1|AAQ22440.1|  784|Drosophila melanogaster RE64209p
           protein.
          Length = 784

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 430 GYHHRTEMNKKIYRIGQGIHK-KDGKV 353
           GY H+ E  KK  RI  G+H+ + G+V
Sbjct: 622 GYEHKREEEKKAVRIYAGVHRSRSGQV 648


>AY122202-1|AAM52714.1|  585|Drosophila melanogaster LD47517p
           protein.
          Length = 585

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 170 CSP-LCMHTQRLSKSNDTLFRSHAATLDH 253
           CS  LC H      S+D LF SH + LDH
Sbjct: 477 CSDGLCNHDVHDEDSDDLLFYSHQSQLDH 505


>AE014297-1164|AAF54536.2|  784|Drosophila melanogaster CG14681-PB,
           isoform B protein.
          Length = 784

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 430 GYHHRTEMNKKIYRIGQGIHK-KDGKV 353
           GY H+ E  KK  RI  G+H+ + G+V
Sbjct: 622 GYEHKREEEKKAVRIYAGVHRSRSGQV 648


>AE014297-323|AAN13256.1|  639|Drosophila melanogaster CG2182-PB,
           isoform B protein.
          Length = 639

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 170 CSP-LCMHTQRLSKSNDTLFRSHAATLDH 253
           CS  LC H      S+D LF SH + LDH
Sbjct: 531 CSDGLCNHDVHDEDSDDLLFYSHQSQLDH 559


>AE014297-322|AAF51975.3|  671|Drosophila melanogaster CG2182-PA,
           isoform A protein.
          Length = 671

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 170 CSP-LCMHTQRLSKSNDTLFRSHAATLDH 253
           CS  LC H      S+D LF SH + LDH
Sbjct: 563 CSDGLCNHDVHDEDSDDLLFYSHQSQLDH 591


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,584,298
Number of Sequences: 53049
Number of extensions: 526519
Number of successful extensions: 1535
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)