Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326D10f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033448-1|AAH33448.1|  460|Homo sapiens chromosome 6 open readi...    29   9.9  
AL355305-3|CAI14559.1|  436|Homo sapiens protein ( Human DNA seq...    29   9.9  
AL355305-2|CAI14560.1|  360|Homo sapiens protein ( Human DNA seq...    29   9.9  

>BC033448-1|AAH33448.1|  460|Homo sapiens chromosome 6 open reading
           frame 182 protein.
          Length = 460

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = -2

Query: 202 ILHLKK*TKTNNLIDIVECQLDSFLFVFVEKREKVYTTFRYEDYACK 62
           +L   K T+++++ D +EC+L+  L     K E++    +++D  CK
Sbjct: 344 LLKQMKETESHSVCDDIECELECLLKKMEIKGEQISKLKKHQDSVCK 390


>AL355305-3|CAI14559.1|  436|Homo sapiens protein ( Human DNA
           sequence from clone RP11-487F23 on chromosome 6. ).
          Length = 436

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = -2

Query: 202 ILHLKK*TKTNNLIDIVECQLDSFLFVFVEKREKVYTTFRYEDYACK 62
           +L   K T+++++ D +EC+L+  L     K E++    +++D  CK
Sbjct: 320 LLKQMKETESHSVCDDIECELECLLKKMEIKGEQISKLKKHQDSVCK 366


>AL355305-2|CAI14560.1|  360|Homo sapiens protein ( Human DNA
           sequence from clone RP11-487F23 on chromosome 6. ).
          Length = 360

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = -2

Query: 202 ILHLKK*TKTNNLIDIVECQLDSFLFVFVEKREKVYTTFRYEDYACK 62
           +L   K T+++++ D +EC+L+  L     K E++    +++D  CK
Sbjct: 244 LLKQMKETESHSVCDDIECELECLLKKMEIKGEQISKLKKHQDSVCK 290


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,481,614
Number of Sequences: 237096
Number of extensions: 804137
Number of successful extensions: 973
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)