Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326D09f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 210 1e-55
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 187 8e-49
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 163 1e-41
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 130 2e-31
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 62 5e-11
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 56 3e-09
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 56 4e-09
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 54 1e-08
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 53 2e-08
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 44 1e-05
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.56
SPAC4F10.02 |||aminopeptidase |Schizosaccharomyces pombe|chr 1||... 27 1.7
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 27 1.7
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 26 3.9
SPBC21C3.18 |spo4||serine/threonine protein kinase Spo4|Schizosa... 26 3.9
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 25 5.2
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 25 5.2
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 25 9.0
SPBC15C4.01c |oca3||TPR repeat protein Oca3|Schizosaccharomyces ... 25 9.0
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 210 bits (512), Expect = 1e-55
Identities = 101/175 (57%), Positives = 129/175 (73%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHP LLTEAPLNP+ NREK ++ FETFN PA ++++QAVLSLYA+GRTTG VLDSGDG
Sbjct: 99 EEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDG 158
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH VPIYEG+A+PH+IMR+D+AGRD+T YL +L + G T+AE EIV+ IKE+ CY
Sbjct: 159 VTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCY 218
Query: 369 LSPNPLKE-ETLENERA---QYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + +E +T + Y LPDG + IG RFRAPE LF+P +G E G
Sbjct: 219 VALDFEQELQTAAQSSSLEKSYELPDGQVITIGNERFRAPEALFQPSALGLENAG 273
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 187 bits (456), Expect = 8e-49
Identities = 93/175 (53%), Positives = 123/175 (70%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHP+LLTE PL RN+EK AE F+ET NVPAL S+Q VL+LYA+ RTTG VL+ GDG
Sbjct: 104 EEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDG 163
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
+TH+VPIY+GF++P +I + ++ GRDVT YL+L LRK G L +SAE EIV+ IKE+ CY
Sbjct: 164 LTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCY 223
Query: 369 LSPNPLKE-ETLENERAQ---YVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + E E+ + Q Y LPD + +G F APEVLF P+++G E G
Sbjct: 224 VASDFRSEIESWTEHKPQIHTYQLPDNQTITLGTECFSAPEVLFNPEMMGSEASG 278
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 163 bits (396), Expect = 1e-41
Identities = 80/172 (46%), Positives = 111/172 (64%), Gaps = 5/172 (2%)
Frame = +3
Query: 21 VLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHA 200
+LLTE P+NP NREK E FE + +++++QAVLSLYA G ++G V+DSGDGVTH
Sbjct: 103 ILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHI 162
Query: 201 VPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACYLS-- 374
VP+YE + H + R+DVAGRD T+YL LL ++G +A+ E V+ +KE+ CY+S
Sbjct: 163 VPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYD 222
Query: 375 ---PNPLKEETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
+ L EET R Y LPDG +++G R+ PE LF+P L+G E G
Sbjct: 223 LELDHKLSEETTVLMR-NYTLPDGRVIKVGSERYECPECLFQPHLVGSEQPG 273
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 130 bits (313), Expect = 2e-31
Identities = 73/184 (39%), Positives = 109/184 (59%), Gaps = 16/184 (8%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYA-------TGRT-TG 164
E+H LLTE PLNP NRE +AE+ FE+FN L++++QAVL+L A T R+ TG
Sbjct: 122 EDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTG 181
Query: 165 AVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVK 344
V+DSGDGVTH +P+ EG+ + SI + +AGRDVT +++ LLR + L+ +
Sbjct: 182 TVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRN---EPDSSLKTAE 238
Query: 345 SIKERACYLSPNPLKE-ETLENERAQY-------VLPDGTQLEIGPARFRAPEVLFRPDL 500
IKE CY+ P+ +KE + E +Y + T +++G RF APE+ F P++
Sbjct: 239 RIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEI 298
Query: 501 IGEE 512
+
Sbjct: 299 ASSD 302
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 62.1 bits (144), Expect = 5e-11
Identities = 31/95 (32%), Positives = 48/95 (50%)
Frame = +3
Query: 12 EHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGV 191
EHP+L+TE NP NR K+ E FE+ PA +L+ Q + +A+G+ T ++D G
Sbjct: 98 EHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAER 157
Query: 192 THAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLR 296
+ IY+GF + +G + L LR
Sbjct: 158 SSVSAIYDGFVLQKGYQVQHFSGNAINDILAQTLR 192
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 56.0 bits (129), Expect = 3e-09
Identities = 25/83 (30%), Positives = 45/83 (54%)
Frame = +3
Query: 12 EHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGV 191
E+ +++TE NP+ R++ E FE +VPA +L+ QAV +A ++T ++D G
Sbjct: 101 EYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDN 160
Query: 192 THAVPIYEGFAMPHSIMRVDVAG 260
P+ +G + I + +AG
Sbjct: 161 ASVTPVVDGLIIRKGIFKQSLAG 183
Score = 30.3 bits (65), Expect = 0.18
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 336 IVKSIKERACYLSPNPLKEETLENERAQ-YVLPDGTQLEIGPARFRAPEVLFRP 494
+++ KE + P E + + + PDG + G RFR E+LF P
Sbjct: 252 VIEEWKESVLDVLDTPFDEAKASSRNPKPFEFPDGVTHKFGQERFRISEILFNP 305
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 55.6 bits (128), Expect = 4e-09
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +3
Query: 12 EHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGR--TTGAVLDSGD 185
EHP+ +TE NP R E+ FE +N P++ + + S Y + ++G VL+ G+
Sbjct: 115 EHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGN 174
Query: 186 GVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLR 296
+H +P+ G + R+ G + YL L +
Sbjct: 175 AASHVIPVLNGERILSEAKRISWGGSQSSSYLLKLFQ 211
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 441 QLEIGPARFRAPEVLFRPDLIGEECEG 521
QL + + R PEV+F P ++G + G
Sbjct: 588 QLHLNVEQIRVPEVIFSPSIVGIDQAG 614
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 54.4 bits (125), Expect = 1e-08
Identities = 33/114 (28%), Positives = 58/114 (50%)
Frame = +3
Query: 15 HPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVT 194
+PV L +RE + + FFE VP ++ + ++ LYA G G V+D G T
Sbjct: 147 YPVCLVIPTYWSLYDRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKT 206
Query: 195 HAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKE 356
PI +G + + ++ + GR +T++L+ LLR+ L++S + + I E
Sbjct: 207 DITPILDGQIIFTATQQLPLGGRYMTQHLQNLLRESLPTLKSSGQYVSKEDITE 260
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 53.2 bits (122), Expect = 2e-08
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Frame = +3
Query: 168 VLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKS 347
V+DSG TH +P+ + ++ RVDV G+ +T YL+ ++ N+ E IV
Sbjct: 160 VIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVNE 217
Query: 348 IKERACYLSPNPLKEETLENERAQ------YVLPD 434
IKE CY+S N ++ + +E+ + Y LPD
Sbjct: 218 IKESVCYVSQNFKEDMEICHEKPRSKLEICYALPD 252
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 44.4 bits (100), Expect = 1e-05
Identities = 27/126 (21%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Frame = +3
Query: 12 EHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGV 191
++ V+ L R EK ++ F + + +++ + + G + V+D G
Sbjct: 243 QYSVIFIVPDLYDRVYVEKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQK 302
Query: 192 THAVPIYEGFAMPHSIMRVDVAGRDVT-KYLRLLLRK----EGVNLRTSAELEIVKSIKE 356
T + EG +P+S ++++ G D+T +++LL+R + ++L+T + + ++K
Sbjct: 303 TSISCVEEGVVVPNSRIKINYGGDDITLLFMKLLMRSHFPYQDIDLKTPYDWSLANALKI 362
Query: 357 RACYLS 374
+ C LS
Sbjct: 363 KYCGLS 368
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.7 bits (61), Expect = 0.56
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 1/150 (0%)
Frame = -2
Query: 454 PISSCVPSGRTYWALSFSKVSSFRGFGDR*HARSLIDLTISSSADVLRFTPSLRSRSLRY 275
P +S +PS ++++ + S+ + + SL+D + SSA + T S S
Sbjct: 109 PATSQLPSSTSFFSPTSSEYTPSST-----ESSSLLDPSSVSSAILPSSTSVEVSISSSS 163
Query: 274 LVTSRPAT-STLMMLCGIANPSYMGTACVTPSPESSTAPVVRPVAYKLRTACIERNNAGT 98
L +S P T ST L + S + + S SS AP +Y L ++ + +++
Sbjct: 164 LSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSY-LSSSSVVSSSSSP 222
Query: 97 LNVSKNTSADFSLFLRGFRGASVNSTGCSS 8
+ S +T SL S +S+ SS
Sbjct: 223 SSSSSSTLTSSSLSTSSIPSTSSSSSSTSS 252
Score = 25.4 bits (53), Expect = 5.2
Identities = 28/116 (24%), Positives = 48/116 (41%)
Frame = -2
Query: 511 SSPIRSGLKSTSGALNRAGPISSCVPSGRTYWALSFSKVSSFRGFGDR*HARSLIDLTIS 332
SS S ST+ + + + I S S + + S +SS + S + S
Sbjct: 252 SSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSS 311
Query: 331 SSADVLRFTPSLRSRSLRYLVTSRPATSTLMMLCGIANPSYMGTACVTPSPESSTA 164
SS+ T S S S +S P +S+ + ++PS + T S +SS++
Sbjct: 312 SSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSS 367
>SPAC4F10.02 |||aminopeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 467
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 384 LKEETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECE 518
L+ +L+NE V+P EIG + E F P ++ CE
Sbjct: 272 LENNSLDNESCVRVVPSFDHEEIGSVSAQGAESTFLPAVLQRICE 316
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1379
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -2
Query: 439 VPSGRTYWALSFSKVSSFRGFGDR*HARSLIDLTISSSADVLRFTPSLRSRS 284
+PS +T W+ S + S F D H R + + +A + TPS+ S
Sbjct: 932 IPSNKTEWSSSSLHIPSHNSFSDI-HHRKIAAHAAAITAASEKLTPSIEETS 982
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 25.8 bits (54), Expect = 3.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 222 RTPRIWGRRASLHRRSPVQHP 160
R PR W +R + + SP QHP
Sbjct: 197 RMPRFWLKRRTNVKSSPSQHP 217
>SPBC21C3.18 |spo4||serine/threonine protein kinase
Spo4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 25.8 bits (54), Expect = 3.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +3
Query: 339 VKSIKERACYLSPNPLKEETLENERAQYVLPDGTQLE----IGPARFRAPEVLFR 491
++ +K+ Y P E+T+ + Y+L D + G FRAPEVLFR
Sbjct: 222 LRKLKQEGKYYDYFPF-EKTIADPPEGYLLHDPRPTKRADRAGTRGFRAPEVLFR 275
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 106 AGTLNVSKNTSADFSLFLRGFRGASVNSTG 17
AG + T DF F GF GAS S+G
Sbjct: 151 AGAFKNGEFTGGDFEGFQNGFAGASSFSSG 180
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 25.4 bits (53), Expect = 5.2
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +2
Query: 365 LPVSEPSEGRDLGE*KGPIRSP*WNTT*DWPGPVQSSRSALQTGPDR 505
LP + RDL +GPIRS WN + SS S L DR
Sbjct: 9 LPKFPELKTRDLQGQQGPIRSLGWNLSGSRLASSSSSGSVLVWNSDR 55
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1428
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -1
Query: 239 DAVRHREPLVYGDG 198
D +R+R+PL+YG G
Sbjct: 1173 DVLRNRQPLLYGSG 1186
>SPBC15C4.01c |oca3||TPR repeat protein Oca3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 282
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 107 CRYIECLKEYFGGLFSIPARVQRCFCQQ 24
CR +E +EYF G F I +C CQQ
Sbjct: 202 CRSVEICEEYFHGWFGI----SKC-CQQ 224
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,227,098
Number of Sequences: 5004
Number of extensions: 45737
Number of successful extensions: 171
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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