Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326D09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 248 2e-66
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 211 2e-55
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 211 2e-55
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 211 2e-55
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 211 2e-55
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 211 3e-55
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 211 3e-55
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 210 3e-55
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 210 3e-55
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 210 3e-55
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 210 3e-55
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 209 1e-54
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 178 2e-45
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 130 4e-31
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 93 1e-19
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 40 8e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 40 8e-04
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 36 0.023
U88314-1|AAF99885.1| 342|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 28 4.7
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 28 4.7
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 28 4.7
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 28 4.7
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 28 4.7
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 28 4.7
U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with ta... 28 4.7
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 28 4.7
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 28 4.7
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 28 4.7
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 28 4.7
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 28 4.7
Z81527-8|CAI91171.1| 537|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z66495-5|CAA91272.1| 501|Caenorhabditis elegans Hypothetical pr... 27 8.1
U97552-5|AAQ01520.1| 605|Caenorhabditis elegans Hypothetical pr... 27 8.1
U97552-4|AAX55684.1| 666|Caenorhabditis elegans Hypothetical pr... 27 8.1
U97552-3|AAQ01521.1| 663|Caenorhabditis elegans Hypothetical pr... 27 8.1
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 27 8.1
U40029-7|AAA81127.1| 645|Caenorhabditis elegans Yeast scc (mito... 27 8.1
AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p4... 27 8.1
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 248 bits (606), Expect = 2e-66
Identities = 117/173 (67%), Positives = 141/173 (81%)
Frame = +3
Query: 3 FSEEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSG 182
F EEHPVLLT+APLNP +NRE+SAE+FFETFNVPAL++ MQAVLSLYATGRTTG VLDSG
Sbjct: 101 FPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSG 160
Query: 183 DGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERA 362
DGVTHAVPI +GFAM H+I R+D+AGRDVT+YLR+LLR+EG S E EIV+ +KE A
Sbjct: 161 DGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENA 220
Query: 363 CYLSPNPLKEETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
CYL+ +P K E + ++ Y LPD T++EI + FRAPEVLF+PDLIG E G
Sbjct: 221 CYLALDPTKVEN-NSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPG 272
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 211 bits (516), Expect = 2e-55
Identities = 98/175 (56%), Positives = 130/175 (74%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG VLDSGDG
Sbjct: 100 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG 159
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G + T+AE EIV+ IKE+ CY
Sbjct: 160 VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Query: 369 LSPNPLKE----ETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + +E + + Y LPDG + +G RFR PE LF+P +G E G
Sbjct: 220 VALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 211 bits (516), Expect = 2e-55
Identities = 98/175 (56%), Positives = 130/175 (74%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG VLDSGDG
Sbjct: 56 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG 115
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G + T+AE EIV+ IKE+ CY
Sbjct: 116 VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 175
Query: 369 LSPNPLKE----ETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + +E + + Y LPDG + +G RFR PE LF+P +G E G
Sbjct: 176 VALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 230
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 211 bits (516), Expect = 2e-55
Identities = 98/175 (56%), Positives = 130/175 (74%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG VLDSGDG
Sbjct: 86 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG 145
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G + T+AE EIV+ IKE+ CY
Sbjct: 146 VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 205
Query: 369 LSPNPLKE----ETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + +E + + Y LPDG + +G RFR PE LF+P +G E G
Sbjct: 206 VALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 260
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 211 bits (516), Expect = 2e-55
Identities = 98/175 (56%), Positives = 130/175 (74%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG VLDSGDG
Sbjct: 100 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG 159
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G + T+AE EIV+ IKE+ CY
Sbjct: 160 VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Query: 369 LSPNPLKE----ETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + +E + + Y LPDG + +G RFR PE LF+P +G E G
Sbjct: 220 VALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 211 bits (515), Expect = 3e-55
Identities = 98/175 (56%), Positives = 130/175 (74%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG VLDSGDG
Sbjct: 100 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 159
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G + T+AE EIV+ IKE+ CY
Sbjct: 160 VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Query: 369 LSPNPLKE----ETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + +E + + Y LPDG + +G RFR PE LF+P +G E G
Sbjct: 220 VALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 211 bits (515), Expect = 3e-55
Identities = 98/175 (56%), Positives = 130/175 (74%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG VLDSGDG
Sbjct: 100 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 159
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G + T+AE EIV+ IKE+ CY
Sbjct: 160 VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Query: 369 LSPNPLKE----ETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + +E + + Y LPDG + +G RFR PE LF+P +G E G
Sbjct: 220 VALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 210 bits (514), Expect = 3e-55
Identities = 97/175 (55%), Positives = 130/175 (74%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG VLDSGDG
Sbjct: 100 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG 159
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G + T+AE EIV+ IKE+ CY
Sbjct: 160 VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Query: 369 LSPNPLKE----ETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + +E + + Y LPDG + +G RFR PE +F+P +G E G
Sbjct: 220 VALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 210 bits (514), Expect = 3e-55
Identities = 97/175 (55%), Positives = 130/175 (74%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG VLDSGDG
Sbjct: 100 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG 159
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G + T+AE EIV+ IKE+ CY
Sbjct: 160 VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Query: 369 LSPNPLKE----ETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + +E + + Y LPDG + +G RFR PE +F+P +G E G
Sbjct: 220 VALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 210 bits (514), Expect = 3e-55
Identities = 97/175 (55%), Positives = 130/175 (74%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG VLDSGDG
Sbjct: 100 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG 159
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G + T+AE EIV+ IKE+ CY
Sbjct: 160 VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Query: 369 LSPNPLKE----ETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + +E + + Y LPDG + +G RFR PE +F+P +G E G
Sbjct: 220 VALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 210 bits (514), Expect = 3e-55
Identities = 97/175 (55%), Positives = 130/175 (74%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG VLDSGDG
Sbjct: 100 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG 159
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G + T+AE EIV+ IKE+ CY
Sbjct: 160 VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 219
Query: 369 LSPNPLKE----ETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + +E + + Y LPDG + +G RFR PE +F+P +G E G
Sbjct: 220 VALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 209 bits (510), Expect = 1e-54
Identities = 99/175 (56%), Positives = 128/175 (73%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
EEHPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG VLD+GDG
Sbjct: 99 EEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDG 158
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH VPIYEG+A+PH+I R+D+AGRD+T Y+ +L + G T+AE EIV+ IKE+ CY
Sbjct: 159 VTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCY 218
Query: 369 LSPNPLKE----ETLENERAQYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + E + + Y LPDG + IG RFR PEVLF+P IG E G
Sbjct: 219 VAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAG 273
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 178 bits (433), Expect = 2e-45
Identities = 87/175 (49%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDG 188
+E +LLTE PLNP NREK +V FE + ++++++QAVL+LYA G TG V+DSGDG
Sbjct: 103 KECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDG 162
Query: 189 VTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACY 368
VTH P+YEGFA+ H R+D+AGRD+TKYL LL + G N SA+ E V+ +KE+ CY
Sbjct: 163 VTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCY 222
Query: 369 LSPNPLKEETLENERA----QYVLPDGTQLEIGPARFRAPEVLFRPDLIGEECEG 521
++ + +EE L E QY LPDG + +G RF APE+LF+P LI E G
Sbjct: 223 IAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAG 277
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 130 bits (315), Expect = 4e-31
Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 18/186 (9%)
Frame = +3
Query: 9 EEHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRT--------TG 164
E+H LLTE PLN NRE +AE+ FE+FNVP L++++QAVL+L A+ + TG
Sbjct: 113 EDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTG 172
Query: 165 AVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVK 344
V+DSGDGVTH +P+ +G+ + I + +AGRD+T +++ LLR + E+ K
Sbjct: 173 LVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAK 232
Query: 345 SIKERACYLSPNPLKE-ETLENERAQYVLP-DGT--------QLEIGPARFRAPEVLFRP 494
IKE+ CY+ P+ +KE + + A+++ DG +++G RF PE+ F P
Sbjct: 233 MIKEKFCYVCPDVMKEFVKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHP 292
Query: 495 DLIGEE 512
+ E
Sbjct: 293 EFCNPE 298
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 93.1 bits (221), Expect = 1e-19
Identities = 41/101 (40%), Positives = 66/101 (65%)
Frame = +3
Query: 12 EHPVLLTEAPLNPRRNREKSAEVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGV 191
EHPVL +E+ N R REK E+ FE F VPA +LS VLS +A GRT G ++DSG
Sbjct: 123 EHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQ 182
Query: 192 THAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 314
T VP+++G+A+ H++++ + G +T+ L +L ++ +++
Sbjct: 183 TSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDV 223
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 49.6 bits (113), Expect = 1e-06
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Frame = +3
Query: 75 EVFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 254
++ E + ++ Q L LYA TTG V+D G+ V + VP+ +G+ + +I +
Sbjct: 294 QICLEDIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPY 352
Query: 255 AGRDVTKYLRLLLRKEGVNL---RTSAELEIVKSIKERACYLSPNPLKEETLENERAQYV 425
+ + LR L L ++ E I++ E+ Y+ + KEE EN+ +
Sbjct: 353 GSQQMGDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRIS 412
Query: 426 L----PD---GTQLEIGPARFRAPEVLFRPDLIGEECEG 521
L P T+ +I +RF E LF+P G + +G
Sbjct: 413 LDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKG 451
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 40.3 bits (90), Expect = 8e-04
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 31/180 (17%)
Frame = +3
Query: 69 SAEVFFETFNVPALFLSMQAVL----SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHS 236
S+E+ F+ F + + + L S V+DSG T G + S
Sbjct: 110 SSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDS 169
Query: 237 IMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACYLSPN---PLKEET--- 398
++R+DV G+ +T L+ + +N+ S E ++ KE C++S N +KE
Sbjct: 170 VIRIDVGGKALTNKLKDWVSYRQLNV--SEETYVINECKEDLCFVSQNFDESMKEARNRF 227
Query: 399 LENERAQ-YVLPD------GT-------------QLEIGPARFRAPEVLFRP-DLIGEEC 515
EN + Y++PD G + +G RF PE+LF P D+ ++C
Sbjct: 228 QENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQC 287
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 40.3 bits (90), Expect = 8e-04
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Frame = +3
Query: 69 SAEVFFETFNVPALFLSMQAVL----SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHS 236
S+E+ F+ F + + + L S V+DSG T G + S
Sbjct: 110 SSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDS 169
Query: 237 IMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKERACYLSPNPLKEETLENERA 416
++R+DV G+ +T L+ + +N+ S E ++ KE C++S N +E+++ R
Sbjct: 170 VIRIDVGGKALTNKLKDWVSYRQLNV--SEETYVINECKEDLCFVSQN--FDESMKEARN 225
Query: 417 QY 422
++
Sbjct: 226 RF 227
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 35.5 bits (78), Expect = 0.023
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = -2
Query: 496 SGLKSTSGALNRAGPISSCVPSGRTYWALSFSKVSSF--RGFGDR*HARSLIDLTISSSA 323
SG STSG + G + S T A+S S S G S + + SS +
Sbjct: 1172 SGSTSTSGEITSQGSTQTPRSSLSTSPAISTSTQQSVSTNSPGSTVTQPSTVRGSTSSGS 1231
Query: 322 DVLRFTPSLRSRSLRYLVTSRPATSTLMMLCGIANPSYMGTACVTPSPESSTAPVV 155
V + S S TS ++S + NPS G++ TP+P ST+PVV
Sbjct: 1232 TVTTGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQSTSPVV 1287
>U88314-1|AAF99885.1| 342|Caenorhabditis elegans Hypothetical
protein C46H11.6 protein.
Length = 342
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 210 YEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIVKSIKER 359
Y G + I++V+ A +++KY L++ E ++ + I+ + +ER
Sbjct: 66 YNGLILSDKIVKVNGASGNISKYQTELMKGETCSVEVTRRKNIIPATRER 115
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 199 PSPYTRGSRCRTAS*GSTWPGVTSPSTLDF 288
PSP T S S G+T+PGV +P+T F
Sbjct: 29 PSPVTFISTTTQQSLGATYPGVFNPTTPTF 58
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 520 PSHSSPIRSGLKSTSGALNRAGPISSCVPSGRTYWALSFSKVSSFR 383
P H +P RSG++ + L + PI + +P T S +S+ R
Sbjct: 198 PQHKTPQRSGIRPPTAILRQPKPIPASLPRPATATPSSQRAISTPR 243
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 520 PSHSSPIRSGLKSTSGALNRAGPISSCVPSGRTYWALSFSKVSSFR 383
P H +P RSG++ + L + PI + +P T S +S+ R
Sbjct: 198 PQHKTPQRSGIRPPTAILRQPKPIPASLPRPATATPSSQRAISTPR 243
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 92 IQCTGIISFNAGRSQFVCNRSYHGCCTGL 178
I C G +S + + VCN +Y+ C G+
Sbjct: 110 INCVGRLSGDYALDKTVCNENYYQCANGI 138
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 520 PSHSSPIRSGLKSTSGALNRAGPISSCVPSGRTYWALSFSKVSSFR 383
P H +P RSG++ + L + PI + +P T S +S+ R
Sbjct: 176 PQHKTPQRSGIRPPTAILRQPKPIPASLPRPATATPSSQRAISTPR 221
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 520 PSHSSPIRSGLKSTSGALNRAGPISSCVPSGRTYWALSFSKVSSFR 383
P H +P RSG++ + L + PI + +P T S +S+ R
Sbjct: 176 PQHKTPQRSGIRPPTAILRQPKPIPASLPRPATATPSSQRAISTPR 221
>U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform d protein.
Length = 252
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 520 PSHSSPIRSGLKSTSGALNRAGPISSCVPSGRTYWALSFSKVSSFR 383
P H +P RSG++ + L + PI + +P T S +S+ R
Sbjct: 50 PQHKTPQRSGIRPPTAILRQPKPIPASLPRPATATPSSQRAISTPR 95
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 520 PSHSSPIRSGLKSTSGALNRAGPISSCVPSGRTYWALSFSKVSSFR 383
P H +P RSG++ + L + PI + +P T S +S+ R
Sbjct: 198 PQHKTPQRSGIRPPTAILRQPKPIPASLPRPATATPSSQRAISTPR 243
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 520 PSHSSPIRSGLKSTSGALNRAGPISSCVPSGRTYWALSFSKVSSFR 383
P H +P RSG++ + L + PI + +P T S +S+ R
Sbjct: 198 PQHKTPQRSGIRPPTAILRQPKPIPASLPRPATATPSSQRAISTPR 243
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 520 PSHSSPIRSGLKSTSGALNRAGPISSCVPSGRTYWALSFSKVSSFR 383
P H +P RSG++ + L + PI + +P T S +S+ R
Sbjct: 198 PQHKTPQRSGIRPPTAILRQPKPIPASLPRPATATPSSQRAISTPR 243
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 199 PSPYTRGSRCRTAS*GSTWPGVTSPSTLDF 288
PSP T S S G+T+PGV +P+T F
Sbjct: 29 PSPVTFISTTTQQSLGATYPGVFNPTTPTF 58
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 199 PSPYTRGSRCRTAS*GSTWPGVTSPSTLDF 288
PSP T S S G+T+PGV +P+T F
Sbjct: 3 PSPVTFISTTTQQSLGATYPGVFNPTTPTF 32
>Z81527-8|CAI91171.1| 537|Caenorhabditis elegans Hypothetical
protein F35E12.7c protein.
Length = 537
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -2
Query: 193 VTPSPESSTAPVVRPVAYKLRTACIERNNAGTLNVSKNTSADFSLFLRGF 44
V PS STAP+V V+ + A + A +++V T SLF GF
Sbjct: 481 VVPSGSFSTAPIVTSVSTR---ATRTGSTATSVHVETTTKGTSSLFSAGF 527
>Z66495-5|CAA91272.1| 501|Caenorhabditis elegans Hypothetical
protein C36A4.6 protein.
Length = 501
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 201 VPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAEL 332
+P+ +G + R G D T L LL+R+E + T E+
Sbjct: 257 LPLVKGLVDLYDRRRAGEGGNDSTDLLNLLIRRETIGKMTQREV 300
>U97552-5|AAQ01520.1| 605|Caenorhabditis elegans Hypothetical
protein W05H7.4a protein.
Length = 605
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 190 TPSPESSTAPVVRPVAYKLRTACIERNNAGTLNVSKNTSADFSL 59
TPSP +S P V P+A ++TA G S+ D+ +
Sbjct: 334 TPSPTTSAPPPVDPLAAAMQTAQQMMLQQGNTYASEEVPQDYPM 377
>U97552-4|AAX55684.1| 666|Caenorhabditis elegans Hypothetical
protein W05H7.4e protein.
Length = 666
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 190 TPSPESSTAPVVRPVAYKLRTACIERNNAGTLNVSKNTSADFSL 59
TPSP +S P V P+A ++TA G S+ D+ +
Sbjct: 395 TPSPTTSAPPPVDPLAAAMQTAQQMMLQQGNTYASEEVPQDYPM 438
>U97552-3|AAQ01521.1| 663|Caenorhabditis elegans Hypothetical
protein W05H7.4b protein.
Length = 663
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 190 TPSPESSTAPVVRPVAYKLRTACIERNNAGTLNVSKNTSADFSL 59
TPSP +S P V P+A ++TA G S+ D+ +
Sbjct: 392 TPSPTTSAPPPVDPLAAAMQTAQQMMLQQGNTYASEEVPQDYPM 435
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +2
Query: 296 QRGSEPQDVRRAGDRQVYQGAGVLPVSEPSEGRDLG 403
++G + +++R+ R+V + + ++PV + EGRD G
Sbjct: 348 KKGKKEKNIRK---RKVLKASDLVPVEKAGEGRDFG 380
>U40029-7|AAA81127.1| 645|Caenorhabditis elegans Yeast scc (mitotic
condensin subunit)homolog protein 1 protein.
Length = 645
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +3
Query: 369 LSPNPLKEETLENERAQYVLPDGTQLEIGPARFRAPEVLF-----RPDLIGEECEG 521
L P P E +E ER + V +GT++ +R A V+F RP+LI + EG
Sbjct: 185 LRPTPQPESLMEVERDRDVAANGTEI----SRIDADSVIFSEGPTRPNLIFDNQEG 236
>AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p450
family protein 25A5 protein.
Length = 477
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 201 VPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAEL 332
+P+ +G + R G D T L LL+R+E + T E+
Sbjct: 233 LPLVKGLVDLYDRRRAGEGGNDSTDLLNLLIRRETIGKMTKREV 276
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,586,786
Number of Sequences: 27780
Number of extensions: 275622
Number of successful extensions: 1003
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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