Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326D04f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase Cka1|Sch... 95 7e-21
SPBP35G2.05c |cki2||serine/threonine protein kinase Cki2|Schizos... 30 0.24
SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 29 0.32
SPBC1347.06c |cki1||serine/threonine protein kinase Cki1|Schizos... 29 0.42
SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa... 29 0.56
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 28 0.97
SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase Srk1|Schizo... 27 1.3
SPBC3H7.06c |pof9||F-box protein Paf9|Schizosaccharomyces pombe|... 27 1.7
SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase Cdc2|Sch... 26 3.0
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 26 3.0
SPCC1020.05 |||phosphoprotein phosphatase |Schizosaccharomyces p... 26 3.9
SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase... 25 5.2
SPAC4A8.03c |ptc4||protein phosphatase 2C Ptc4|Schizosaccharomyc... 25 5.2
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 25 5.2
SPCC16C4.11 |pef1||Pho85/PhoA-like cyclin-dependent kinase Pef1|... 25 5.2
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 25 6.8
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 25 9.0
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 25 9.0
>SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase
Cka1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 94.7 bits (225), Expect = 7e-21
Identities = 45/98 (45%), Positives = 60/98 (61%)
Frame = +3
Query: 228 VPSRARVYADVNSQRPREYWDYESYVVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNEX 407
V S +RVYA VN + PREYWDYE+ +G Q++Y+++RK+GRGKYSEVFE +N+ NN
Sbjct: 9 VVSVSRVYAHVNEEMPREYWDYENMQEVFGYQDNYEIIRKVGRGKYSEVFEGLNVLNNSK 68
Query: 408 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIISLQAVVK 521
L+NL GG NIISL +V+
Sbjct: 69 CIIKVLKPVKYKKIKREIKILQNLAGGPNIISLLDIVR 106
>SPBP35G2.05c |cki2||serine/threonine protein kinase
Cki2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 29.9 bits (64), Expect = 0.24
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 330 YQLVRKLGRGKYSEVFEAINITNNE 404
Y++ RK+G G + +F+ +N+ NN+
Sbjct: 12 YRVGRKIGEGSFGVIFDGMNLLNNQ 36
>SPBC776.12c |hsk1||serine/threonine protein kinase
Hsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 29.5 bits (63), Expect = 0.32
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 321 QEDYQLVRKLGRGKYSEVFEA 383
QE+Y+L+ K+G G +S V++A
Sbjct: 65 QENYRLIEKIGEGTFSSVYKA 85
>SPBC1347.06c |cki1||serine/threonine protein kinase
Cki1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 29.1 bits (62), Expect = 0.42
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 330 YQLVRKLGRGKYSEVFEAINITNNE 404
Y++ R++G G + +FE N+ NN+
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQ 36
>SPAC1805.05 |cki3||serine/threonine protein kinase
Cki3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 439
Score = 28.7 bits (61), Expect = 0.56
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +3
Query: 330 YQLVRKLGRGKYSEVFEAINITNNE 404
Y++ +K+G G + +F+ +N+ NN+
Sbjct: 15 YRVGKKIGEGSFGMLFQGVNLINNQ 39
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 27.9 bits (59), Expect = 0.97
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 303 VVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNE 404
VVD Y++ RK+G G + +++ +N N E
Sbjct: 3 VVDIKIGNKYRIGRKIGSGSFGQIYLGLNTVNGE 36
>SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase
Srk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 580
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 324 EDYQLVRKLGRGKYSEVFEAINITNNE 404
E Y L++K+G G +S V++AI+ E
Sbjct: 122 EQYTLLQKMGDGAFSNVYKAIHNRTGE 148
>SPBC3H7.06c |pof9||F-box protein Paf9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 467
Score = 27.1 bits (57), Expect = 1.7
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +3
Query: 159 TYAISGKTIADKTFGLQRHSTMAVPSRARVYADVNSQRPREYWDYESYVVDWGNQEDYQL 338
+Y KTI + + T VP D N +RP W Y WG Q L
Sbjct: 37 SYVFDDKTIWHRFCARVQGLTNVVP-----VVDDNYKRPYAVWKDRGYAYSWGQQIRNYL 91
Query: 339 VRKLGRGKY 365
R + +Y
Sbjct: 92 GRVVNTNQY 100
>SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase
Cdc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 324 EDYQLVRKLGRGKYSEVFEA 383
E+YQ V K+G G Y V++A
Sbjct: 2 ENYQKVEKIGEGTYGVVYKA 21
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 26.2 bits (55), Expect = 3.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 327 DYQLVRKLGRGKYSEVFEA 383
DY L+ KLG G + EV+++
Sbjct: 35 DYHLMEKLGEGTFGEVYKS 53
>SPCC1020.05 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 509
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/61 (24%), Positives = 23/61 (37%)
Frame = -3
Query: 381 LQILHCISRDPACEPTDSLLGCPSQLHNFRNPNIPLDVVSSHQRRPSLY*VLPSYCAFVN 202
++++ C S P C P N IP + +RP+LY +P V
Sbjct: 55 IRLVECFSFSPFCRPVLEFWKWARTSRNLYRSRIPWKRAYLYVKRPALY--IPGETVLVE 112
Query: 201 Q 199
Q
Sbjct: 113 Q 113
>SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase
Cmk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 330 YQLVRKLGRGKYSEVFEAINITNNE 404
Y++ R LG G Y+ V EA++I N+
Sbjct: 31 YRVGRVLGGGTYATVREAVHIETNK 55
>SPAC4A8.03c |ptc4||protein phosphatase 2C Ptc4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 25.4 bits (53), Expect = 5.2
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 225 AVPSRARVYADVNSQRPREYWDYESYVV 308
AVP A + S+ YW+ +SY++
Sbjct: 182 AVPGAVGTVAIITSKNNLSYWESDSYII 209
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.4 bits (53), Expect = 5.2
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 330 YQLVRKLGRGKYSEVFEAINITNNE 404
Y+ + ++G G Y +V++AIN +
Sbjct: 277 YEKIDQIGEGTYGKVYKAINTVTGD 301
>SPCC16C4.11 |pef1||Pho85/PhoA-like cyclin-dependent kinase
Pef1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 288
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 327 DYQLVRKLGRGKYSEVFEAINITNNE 404
+YQ + KLG G Y+ V++ N E
Sbjct: 2 NYQRLEKLGEGTYAHVYKGQNRVTGE 27
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 369 HCISRDPACEPTDSLLG 319
HC+ P CE DSL G
Sbjct: 94 HCVENTPGCEFPDSLNG 110
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 204 LQRHSTMAVPS-RARVYADVNSQRPREYWDYESYVV 308
+ + ST P + R+ DV RPR+ + + YVV
Sbjct: 1 MDKQSTFQDPKEKHRIQRDVKLSRPRKRFSFLDYVV 36
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 398 IRNIYCFKYFTVFPATQLANQLIVFLVA 315
I N FKY VF A L +I+FL A
Sbjct: 427 ISNSIGFKYGYVFAACNLCAAIIIFLFA 454
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,787,861
Number of Sequences: 5004
Number of extensions: 33060
Number of successful extensions: 113
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -