Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326D03f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0141 - 31955782-31956801 39 0.003
12_01_0054 + 463743-464414,464896-465024,465336-465440,465524-46... 30 0.98
11_01_0054 + 416626-417297,417757-417885,418197-418301,418385-41... 30 0.98
07_01_1203 - 11464142-11464324,11464422-11464484,11464685-114665... 30 0.98
05_03_0104 - 8426374-8426542,8426656-8426828,8427020-8427103,842... 30 1.3
08_01_0501 + 4345522-4345720,4346598-4347167,4347294-4347366,435... 29 2.3
01_06_0790 + 32019972-32020101,32020461-32020657,32020790-320209... 29 2.3
11_06_0580 - 25184019-25184024,25184096-25184851,25184870-251849... 29 3.0
10_01_0200 + 2171178-2172338 29 3.0
11_06_0226 + 21461174-21462018,21462508-21464439,21464746-21464845 28 4.0
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 4.0
11_01_0790 + 6617659-6619593,6619696-6620106 28 5.2
10_01_0180 - 2037656-2037858,2038517-2038579,2038909-2039782 28 5.2
08_01_0601 - 5268520-5271112,5272448-5272950 27 6.9
06_01_0558 - 3968211-3969475,3970198-3970266,3970374-3970529,397... 27 6.9
02_02_0645 - 12599888-12600527,12602879-12603192 27 6.9
01_01_0426 + 3234987-3235935,3236744-3236782,3237044-3237409,324... 27 6.9
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 27 9.1
>03_06_0141 - 31955782-31956801
Length = 339
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 179 SPALLNLPAEMIILIIKYLDTPTVYNIYNTCKPLREII 292
SP+LL+LP ++++ I+ D TV ++ TCK LR II
Sbjct: 41 SPSLLDLPLDVLLKIVARCDAATVLSLAATCKALRRII 78
>12_01_0054 +
463743-464414,464896-465024,465336-465440,465524-465917,
466325-466422,466505-466753,466920-466979
Length = 568
Score = 30.3 bits (65), Expect = 0.98
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +2
Query: 386 SLKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVT----YTDISI 505
SL++LSLS +T T L V LK+L LDVT TD+S+
Sbjct: 341 SLRELSLSKCSGVTDTDLSFVVPRLKNLLKLDVTCCRKITDVSL 384
>11_01_0054 +
416626-417297,417757-417885,418197-418301,418385-418778,
419186-419283,419366-419614,419784-419843
Length = 568
Score = 30.3 bits (65), Expect = 0.98
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +2
Query: 386 SLKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVT----YTDISI 505
SL++LSLS +T T L V LK+L LDVT TD+S+
Sbjct: 341 SLRELSLSKCSGVTDTDLSFVVPRLKNLLKLDVTCCRKITDVSL 384
>07_01_1203 -
11464142-11464324,11464422-11464484,11464685-11466515,
11467240-11468036
Length = 957
Score = 30.3 bits (65), Expect = 0.98
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 323 SLNILSTAD-SLKTDFFKAVAYSLKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDV 484
+L +L+ D + +F +L+ L GM + K +L Q + +L+ LQTLDV
Sbjct: 567 ALRVLALEDCDITGGYFLKHLGNLRQLRYLGMRNTGKVELPQEIGNLRHLQTLDV 621
>05_03_0104 -
8426374-8426542,8426656-8426828,8427020-8427103,
8427110-8427205,8427530-8427616,8428639-8428767,
8428922-8429098,8429185-8429295,8429642-8429761,
8430767-8432427,8432485-8432867,8433707-8434470,
8434532-8434813,8436158-8436493
Length = 1523
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2
Query: 386 SLKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDV 484
SL L G+ D TKL + VR+LK LQTLD+
Sbjct: 768 SLLHLRYLGLVDTYITKLPREVRYLKFLQTLDL 800
>08_01_0501 +
4345522-4345720,4346598-4347167,4347294-4347366,
4351133-4353092,4353465-4353840,4353932-4354326,
4354597-4354765,4355444-4355518,4357699-4357826,
4357988-4358213,4358290-4358417,4358505-4358768
Length = 1520
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 326 LNILSTADSLKTDFFKAVAYSLKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDI 499
L +L + SL D L L + TKL + + L L+TLD++YT+I
Sbjct: 579 LRVLDLSYSLLKDKHLKNIEKLHFLKYLSLRSTLITKLPRKIGQLNCLETLDISYTEI 636
>01_06_0790 +
32019972-32020101,32020461-32020657,32020790-32020993,
32021444-32021645,32021798-32021886,32022567-32022662,
32022710-32022814,32023516-32023556,32023685-32023777,
32023853-32023970,32024488-32024578,32024693-32024766,
32025008-32025187,32025643-32025681
Length = 552
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 521 CQVNHRCLYQCMLHLKSVDFSNGVR 447
C ++ CL CM+H+K V +N R
Sbjct: 359 CSLSWHCLTHCMVHVKKVQLANRFR 383
>11_06_0580 -
25184019-25184024,25184096-25184851,25184870-25184927,
25185306-25185376
Length = 296
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 507 QMLISVYVTSKVCRLFKWRTACMSLVFVKSCIPLSDRSFRL 385
QML+++YV SK R KW +++FV ++R + L
Sbjct: 134 QMLMAIYVVSKQWRGDKWLAVPTAIMFVAGTTRYAERIWAL 174
>10_01_0200 + 2171178-2172338
Length = 386
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 197 LPAEMII-LIIKYLDTPTVYNIYNTCKPLREIIT 295
LP E+++ ++I+ D + + CKPLR +IT
Sbjct: 10 LPEELVVEILIRLTDLADLARAASACKPLRRLIT 43
>11_06_0226 + 21461174-21462018,21462508-21464439,21464746-21464845
Length = 958
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 389 LKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDI 499
L+ L GM D +L + L LQTLDV YT +
Sbjct: 608 LRQLRYLGMKDTRVAELPMEIGDLVHLQTLDVRYTGL 644
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 386 SLKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDIS 502
SL+ LS++G H+L + L SL +DV+ TD+S
Sbjct: 249 SLRFLSVAGCHNLKWATASTSWAQLPSLVAVDVSRTDVS 287
>11_01_0790 + 6617659-6619593,6619696-6620106
Length = 781
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 326 LNILSTADSLKTDFFKAVAYSLKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDI 499
L++L DS ++ ++ +L +L G+ KL + + +L +LQTLD+ T I
Sbjct: 482 LSVLELQDSEISEVPTSIG-NLFNLRYIGLRRTNVCKLPECIENLSNLQTLDIKQTKI 538
>10_01_0180 - 2037656-2037858,2038517-2038579,2038909-2039782
Length = 379
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 182 PALLNLPAEMIILIIKYLDTPTVYNIYNTCKPLREIITQGVVKNLKF 322
P L +LP ++ I++ L + +Y TC LR++I V N F
Sbjct: 182 PRLTSLPPDLQEDILRRLAVEDIAAMYFTCTGLRDLIAGSEVLNNNF 228
>08_01_0601 - 5268520-5271112,5272448-5272950
Length = 1031
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 410 GMHDLTKTKLIQAVRHLKSLQTLDVTYTDI 499
G+ L +V+ L++LQTLDV+ TD+
Sbjct: 691 GLSHTAMRHLPSSVKRLRNLQTLDVSRTDV 720
>06_01_0558 -
3968211-3969475,3970198-3970266,3970374-3970529,
3971075-3971405
Length = 606
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 446 AVRHLKSLQTLDVTYTDIS 502
AV HL++L TLD++Y +IS
Sbjct: 412 AVSHLENLSTLDLSYNNIS 430
>02_02_0645 - 12599888-12600527,12602879-12603192
Length = 317
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 344 ADSLKTD----FFKAVAYSLKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDI 499
ADS TD + A SLK L LS +++ + +A++ L+ LD+T+ +
Sbjct: 90 ADSFVTDGLLLYISERASSLKSLQLSMCLNVSNEGMAEAMKGFPRLEELDITFCSL 145
>01_01_0426 +
3234987-3235935,3236744-3236782,3237044-3237409,
3240871-3242315
Length = 932
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +2
Query: 362 DFFKAVA-YSLKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTY-TDISI 505
+FF ++ S+ D+S + TK+ HLKSL+TLD++ TD+SI
Sbjct: 76 EFFAEISSLSILDISDNSFEGQFPTKIF----HLKSLRTLDLSMNTDLSI 121
>05_07_0003 + 26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +2
Query: 137 INAVSNPTKVKMEESPALLNLPAEMIILIIKYLDTPTVYNIY-NTCK-PLREIITQGVVK 310
+ S KVK EE+ + + I + + + Y C+ P+R+ I QG+V
Sbjct: 895 LEGFSADAKVKYEEATQVAHDAVSSIRTVASFCAENRIMKAYYKKCEAPVRQGIRQGIVS 954
Query: 311 NLKFSLNILSTADSLKTDFFKAVAYSL 391
L F ++ + F+ + L
Sbjct: 955 GLGFGISFFVLYSTYALCFYVGAKFML 981
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,144,529
Number of Sequences: 37544
Number of extensions: 185847
Number of successful extensions: 432
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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