Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326D03f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY736034-1|AAU50678.1| 478|Homo sapiens F-box and WD-40 repeat ... 36 0.065
BC063415-1|AAH63415.1| 412|Homo sapiens F-box and WD repeat dom... 32 1.1
AL627424-2|CAI41027.1| 412|Homo sapiens F-box and WD repeat dom... 32 1.1
AL627144-3|CAI12232.1| 412|Homo sapiens F-box and WD repeat dom... 32 1.1
AF281859-1|AAG22739.1| 412|Homo sapiens dactylin protein. 32 1.1
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 30 4.3
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 30 4.3
AF035582-1|AAB88198.1| 897|Homo sapiens CASK protein. 30 5.7
BC008586-1|AAH08586.1| 602|Homo sapiens leucine rich repeat con... 29 9.9
BC003407-1|AAH03407.2| 581|Homo sapiens LRRC40 protein protein. 29 9.9
AL353771-3|CAI22332.1| 602|Homo sapiens leucine rich repeat con... 29 9.9
AK022951-1|BAB14326.1| 602|Homo sapiens protein ( Homo sapiens ... 29 9.9
>AY736034-1|AAU50678.1| 478|Homo sapiens F-box and WD-40 repeat
containing protein 9 protein.
Length = 478
Score = 36.3 bits (80), Expect = 0.065
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 158 TKVKMEESPALLNLPAEMIILIIKYLDTPTVYNIYN-TCKPLREIITQGVVKNLK 319
++V P LL+LP E+++ I YLD V ++ + C LR++++ V L+
Sbjct: 69 SRVSAVSEPGLLSLPPELLLEICSYLDARLVLHVLSRVCHALRDLVSDHVTWRLR 123
>BC063415-1|AAH63415.1| 412|Homo sapiens F-box and WD repeat domain
containing 4 protein.
Length = 412
Score = 32.3 bits (70), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 182 PALLNLPAEMIILIIKYLDTPTVYNIYNTCKPLREIITQGVVKNLKFSLNILSTADSLKT 361
PAL LP E+++LI YLD + + C+ LR + ++ ++ S L T
Sbjct: 26 PALWRLPEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNSGFTRLGT 85
Query: 362 DFFKAV 379
D +V
Sbjct: 86 DLMTSV 91
>AL627424-2|CAI41027.1| 412|Homo sapiens F-box and WD repeat domain
containing 4 protein.
Length = 412
Score = 32.3 bits (70), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 182 PALLNLPAEMIILIIKYLDTPTVYNIYNTCKPLREIITQGVVKNLKFSLNILSTADSLKT 361
PAL LP E+++LI YLD + + C+ LR + ++ ++ S L T
Sbjct: 26 PALWRLPEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNSGFTRLGT 85
Query: 362 DFFKAV 379
D +V
Sbjct: 86 DLMTSV 91
>AL627144-3|CAI12232.1| 412|Homo sapiens F-box and WD repeat domain
containing 4 protein.
Length = 412
Score = 32.3 bits (70), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 182 PALLNLPAEMIILIIKYLDTPTVYNIYNTCKPLREIITQGVVKNLKFSLNILSTADSLKT 361
PAL LP E+++LI YLD + + C+ LR + ++ ++ S L T
Sbjct: 26 PALWRLPEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNSGFTRLGT 85
Query: 362 DFFKAV 379
D +V
Sbjct: 86 DLMTSV 91
>AF281859-1|AAG22739.1| 412|Homo sapiens dactylin protein.
Length = 412
Score = 32.3 bits (70), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 182 PALLNLPAEMIILIIKYLDTPTVYNIYNTCKPLREIITQGVVKNLKFSLNILSTADSLKT 361
PAL LP E+++LI YLD + + C+ LR + ++ ++ S L T
Sbjct: 26 PALWRLPEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNSGFTRLGT 85
Query: 362 DFFKAV 379
D +V
Sbjct: 86 DLMTSV 91
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 395 DLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDI--SICDL 514
DL S L++ + I+ V+H ++LQ TY D+ S+CDL
Sbjct: 3987 DLEPSPQPPLSRAEAIKQVKHFRALQEQARTYLDLLCSMCDL 4028
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 395 DLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDI--SICDL 514
DL S L++ + I+ V+H ++LQ TY D+ S+CDL
Sbjct: 4058 DLEPSPQPPLSRAEAIKQVKHFRALQEQARTYLDLLCSMCDL 4099
>AF035582-1|AAB88198.1| 897|Homo sapiens CASK protein.
Length = 897
Score = 29.9 bits (64), Expect = 5.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 161 KVKMEESPALLNLPAEMIILIIKYLDTPTVYNIYNTCKPLREIITQ 298
K+ + SP + NLP++ + + L+ + Y N K L+ I+TQ
Sbjct: 383 KINTKSSPQIRNLPSDAVQRAKEVLEEISCYPENNDAKELKRILTQ 428
>BC008586-1|AAH08586.1| 602|Homo sapiens leucine rich repeat
containing 40 protein.
Length = 602
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 389 LKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDISI 505
L L++ +HD T L A+R L++LQ L+V++ + I
Sbjct: 104 LPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKI 142
>BC003407-1|AAH03407.2| 581|Homo sapiens LRRC40 protein protein.
Length = 581
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 389 LKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDISI 505
L L++ +HD T L A+R L++LQ L+V++ + I
Sbjct: 83 LPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKI 121
>AL353771-3|CAI22332.1| 602|Homo sapiens leucine rich repeat
containing 40 protein.
Length = 602
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 389 LKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDISI 505
L L++ +HD T L A+R L++LQ L+V++ + I
Sbjct: 104 LPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKI 142
>AK022951-1|BAB14326.1| 602|Homo sapiens protein ( Homo sapiens
cDNA FLJ12889 fis, clone NT2RP2004098, weakly similar to
ADENYLATE CYCLASE (EC 4.6.1.1). ).
Length = 602
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 389 LKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDISI 505
L L++ +HD T L A+R L++LQ L+V++ + I
Sbjct: 104 LPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKI 142
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,674,541
Number of Sequences: 237096
Number of extensions: 1023054
Number of successful extensions: 9537
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9537
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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