Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326D03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M19017-1|AAA28425.1| 1134|Drosophila melanogaster protein ( D.me...    33   0.18 
AE014297-4717|AAF57127.1| 1315|Drosophila melanogaster CG1744-PA...    33   0.18 
AY118581-1|AAM49950.1|  272|Drosophila melanogaster LD43891p pro...    29   5.1  
AE014134-2378|AAF53320.2|  283|Drosophila melanogaster CG9031-PA...    29   5.1  

>M19017-1|AAA28425.1| 1134|Drosophila melanogaster protein (
           D.melanogaster chaoptingene, exon 10. ).
          Length = 1134

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = +2

Query: 305 VKNLKFSLNILSTADSLKTDFFKAVAYSLKDLSLSGMHDLTKTKL-IQAVRHLKSLQTLD 481
           +K L FS N +S   S++ D F  + +SL  L +S  H  + + L  + +RHL SLQ LD
Sbjct: 478 LKRLDFSENGIS---SIENDAFHEIGHSLISLKMS--HGYSGSALPAEPLRHLTSLQELD 532

Query: 482 VTYTDIS 502
            +   IS
Sbjct: 533 FSNNHIS 539


>AE014297-4717|AAF57127.1| 1315|Drosophila melanogaster CG1744-PA
           protein.
          Length = 1315

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = +2

Query: 305 VKNLKFSLNILSTADSLKTDFFKAVAYSLKDLSLSGMHDLTKTKL-IQAVRHLKSLQTLD 481
           +K L FS N +S   S++ D F  + +SL  L +S  H  + + L  + +RHL SLQ LD
Sbjct: 478 LKRLDFSENGIS---SIENDAFHEIGHSLISLKMS--HGYSGSALPAEPLRHLTSLQELD 532

Query: 482 VTYTDIS 502
            +   IS
Sbjct: 533 FSNNHIS 539


>AY118581-1|AAM49950.1|  272|Drosophila melanogaster LD43891p
           protein.
          Length = 272

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
 Frame = +2

Query: 137 INAVSNPTKVKMEESPALLNLPAEMIIL----IIKYLDTPTVYNIYN 265
           ++ +SN + +KMEE+P  +N  AE  +L    +I YL T T   IYN
Sbjct: 201 LDLLSNKSVMKMEENP-WVNPIAEQYLLGISHVIDYLKTETYKIIYN 246


>AE014134-2378|AAF53320.2|  283|Drosophila melanogaster CG9031-PA
           protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
 Frame = +2

Query: 137 INAVSNPTKVKMEESPALLNLPAEMIIL----IIKYLDTPTVYNIYN 265
           ++ +SN + +KMEE+P  +N  AE  +L    +I YL T T   IYN
Sbjct: 212 LDLLSNKSVMKMEENP-WVNPIAEQYLLGISHVIDYLKTETYKIIYN 257


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,903,888
Number of Sequences: 53049
Number of extensions: 355006
Number of successful extensions: 673
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)