Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326D02f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0130 + 1182504-1182817,1183024-1183152,1183582-1183716,118... 92 3e-19
01_06_0299 + 28305447-28305729,28305892-28306104,28306915-283070... 79 2e-15
08_02_1260 - 25680618-25680677,25680763-25680893,25681085-256811... 50 9e-07
05_04_0192 + 18936955-18937168,18937385-18937498,18937588-189376... 50 1e-06
06_01_0375 + 2699179-2699264,2699697-2699786,2699913-2699991,270... 36 0.026
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 35 0.046
04_03_0669 + 18531419-18531820,18532589-18532690,18532882-185329... 34 0.060
02_01_0548 + 4035265-4035431,4035517-4035651,4035859-4036081,403... 34 0.080
11_06_0082 + 19891184-19891332,19891349-19891445,19891584-198917... 32 0.24
07_01_0752 - 5783305-5783416,5783739-5783836,5784550-5784675,578... 32 0.24
02_02_0299 - 8726024-8726101,8726460-8726534,8726836-8726965,872... 32 0.32
05_07_0008 - 27007919-27007944,27008070-27008127,27008218-270082... 30 0.98
09_02_0548 - 10467342-10468810,10470309-10471632 29 3.0
11_03_0151 - 10816905-10816977,10817090-10817421,10817884-108179... 28 4.0
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 28 5.2
04_04_0421 - 25096422-25096594,25096658-25096830,25096918-250969... 28 5.2
03_06_0384 - 33542955-33543024,33543176-33543273,33543445-335435... 27 6.9
03_01_0254 + 1983806-1984882 27 6.9
05_01_0035 - 232656-232781,233212-233322,233419-233563,233749-23... 27 9.1
04_01_0020 + 307110-307809,308412-308476,309245-309544 27 9.1
>01_01_0130 +
1182504-1182817,1183024-1183152,1183582-1183716,
1184296-1184392,1184633-1184736,1184924-1184975,
1185261-1185458
Length = 342
Score = 91.9 bits (218), Expect = 3e-19
Identities = 49/152 (32%), Positives = 89/152 (58%), Gaps = 5/152 (3%)
Frame = +1
Query: 43 EIMDETELDPSVLGTREYWKE-AYAKEIRNFDEFGDTGDVWFGEDSALRVIRW---ICDC 210
++ D +++P +LG Y ++ +YA+ + NF E T D WFG ++ ++ W +C
Sbjct: 109 DVPDSADMEPPLLGLPNYHQDGSYAEYLANFQERSHTDD-WFGTENMDVLVSWTKNLCSN 167
Query: 211 GVDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVA-KQNYPFINYKLF 387
R+ ++D+G G+G +LAK+GF++L G+D+ E AI +AR +A + + IN+ +
Sbjct: 168 KDLRSCSVLDIGTGSGRLSQQLAKQGFSDLTGIDHSEGAIEVARNLAIRDGFEHINFLVD 227
Query: 388 DITTDDVIALGQYAIVHDKGTYDAIGLNPIDP 483
D+ + ++ +V D+GT D IGL+P P
Sbjct: 228 DVLESKLER--RFELVMDEGTLDTIGLHPDGP 257
>01_06_0299 +
28305447-28305729,28305892-28306104,28306915-28307043,
28307677-28307857,28308329-28308425,28309157-28309260,
28309734-28309785,28310040-28310252
Length = 423
Score = 79.4 bits (187), Expect = 2e-15
Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Frame = +1
Query: 205 DCGVDR----NSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKV-AKQNYPF 369
+C VD N P++D+G GNG L LAK+GF+NL G DY E AI LA+ + A+ +
Sbjct: 238 NCEVDEKQLSNYPVLDVGTGNGLLLQALAKQGFSNLTGTDYSEGAIELAKNLAARDGFTS 297
Query: 370 INYKLFDITTDDVIALGQYAIVHDKGTYDAIGLNPIDPKACREKYIEQI 516
IN+ + DI + ++ IV DKGT DAIGL+P D + R Y E +
Sbjct: 298 INFLVDDILETKLDR--KFKIVTDKGTLDAIGLHP-DGRIKRVMYWESV 343
>08_02_1260 -
25680618-25680677,25680763-25680893,25681085-25681163,
25681250-25681280,25681358-25681410,25681441-25681511,
25681610-25681678,25681776-25681889,25683101-25683293
Length = 266
Score = 50.4 bits (115), Expect = 9e-07
Identities = 35/134 (26%), Positives = 57/134 (42%)
Frame = +1
Query: 82 GTREYWKEAYAKEIRNFDEFGDTGDVWFGEDSALRVIRWICDCGVDRNSPIIDLGCGNGY 261
G YW E Y KE FD W+ + AL + + V R+ ++ GCGN
Sbjct: 17 GEAWYWDERYRKEAGPFD--------WYQKYPALAPLLAVY---VRRHHRLLLAGCGNSV 65
Query: 262 TLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFDITTDDVIALGQYAIVHD 441
+ +G+ +++ +D I +K + P + Y D+ G + V D
Sbjct: 66 FGENMVDDGYQDIVNIDISSVVIDQMKKKYRDK-PHLKYMKMDVRNMAEFESGSFDAVID 124
Query: 442 KGTYDAIGLNPIDP 483
KGT D+I ++P P
Sbjct: 125 KGTLDSIMVSPFLP 138
>05_04_0192 +
18936955-18937168,18937385-18937498,18937588-18937656,
18937807-18937826,18937932-18937984,18938082-18938139,
18938338-18938367,18938468-18938719
Length = 269
Score = 49.6 bits (113), Expect = 1e-06
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Frame = +1
Query: 82 GTREYWKEAYAKEIRNFDEF-GDTGDVWFGEDSALRVIRWICDCGVDRNSPIIDLGCGNG 258
G YW Y+ + G G +F A +R + + +S ++ LGCGN
Sbjct: 12 GAAAYWDARYSSPSPSSTATTGGGGGAFFDWYQAYPALRPLLRARLPASSRVLMLGCGNS 71
Query: 259 YTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFDITTDDVIALGQYAIVH 438
++ K+G+ ++ VD I R+ + P + Y D+ + G + V
Sbjct: 72 LLSEDMVKDGYEEVVNVDISSVVIEQMRE-KHVDIPQLTYFQMDVRDMSLFGDGTFDCVL 130
Query: 439 DKGTYDAI 462
DKGT DA+
Sbjct: 131 DKGTLDAM 138
>06_01_0375 +
2699179-2699264,2699697-2699786,2699913-2699991,
2700816-2700893,2701290-2701338,2702183-2702232,
2702704-2702853,2703437-2703517,2703593-2703609,
2705804-2705893,2706033-2706111,2706234-2706311,
2707554-2707687,2707858-2707936,2708108-2708188,
2708263-2708400
Length = 452
Score = 35.5 bits (78), Expect = 0.026
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 232 IIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFDITTDDVI 411
+ID+GCG G LA+ G T + G+D + I +AR A + + + F T +D++
Sbjct: 73 VIDVGCGGGILSEPLARMGAT-VTGIDAVDKNIKIARVHAASDPSTASIEYFCTTAEDLV 131
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 232 IIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLAR 342
IID+GC G LA+ G T + G+D + +I +AR
Sbjct: 271 IIDVGCAAGMLSEPLARMGAT-VTGIDAADESIKIAR 306
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 34.7 bits (76), Expect = 0.046
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 232 IIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQN 360
++D+GCG G AK G + ++ VD +++A +VAK N
Sbjct: 295 VLDVGCGTGILSLFAAKAGASRVIAVDGSAKMVSVATEVAKSN 337
>04_03_0669 +
18531419-18531820,18532589-18532690,18532882-18532948,
18533530-18533708,18533792-18534052,18535324-18535407,
18535517-18535564,18535654-18535718,18536849-18536897,
18538132-18538372,18539623-18539744,18539942-18540022,
18540094-18540168,18540408-18540550,18540662-18540812,
18540915-18541097
Length = 750
Score = 34.3 bits (75), Expect = 0.060
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 244 GCGNGYTLSELAKEGFTNLLGVDYCEAAIT-LARKVAKQNYPFINYKLFDITTDDVIALG 420
GCG+ L GF + VD+ + + R+ A+ P + +++ D+ TD G
Sbjct: 81 GCGSSVLSERLYDAGFRRVTNVDFSRVLVADMLRRHARAR-PEMRWRVMDM-TDMQFTDG 138
Query: 421 QYAIVHDKGTYDAI 462
+ ++ DKG DA+
Sbjct: 139 SFDVILDKGGLDAL 152
>02_01_0548 +
4035265-4035431,4035517-4035651,4035859-4036081,
4036282-4036468,4036627-4036811,4037435-4037572,
4037995-4038123
Length = 387
Score = 33.9 bits (74), Expect = 0.080
Identities = 26/100 (26%), Positives = 48/100 (48%)
Frame = +1
Query: 214 VDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFDI 393
+ ++ ++DL C +G AK G N++G+D +A+ LA K N ++ +
Sbjct: 208 LSKDQRVLDLCCYSGGFALNAAKGGANNVIGIDSSASALDLANKNIILNK--LDTQRISF 265
Query: 394 TTDDVIALGQYAIVHDKGTYDAIGLNPIDPKACREKYIEQ 513
+D A + AI ++ +D + L+P PK K + Q
Sbjct: 266 VKEDATAFMKGAISRNE-VWDLVILDP--PKLAPRKKVLQ 302
>11_06_0082 +
19891184-19891332,19891349-19891445,19891584-19891725,
19891853-19891935,19892356-19892490,19892759-19892863,
19893043-19893168
Length = 278
Score = 32.3 bits (70), Expect = 0.24
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +1
Query: 232 IIDLGCGNGYTLSELAKEGFT-NLLGVDYCEAAITLAR-KVAKQNYPFINYKLFDITTDD 405
++++GCGN EL +EG + VD A+ R ++A+Q + + D+ D
Sbjct: 83 VLEVGCGNSRLGEELLREGVAGGITCVDLSPVAVQRMRDRLAEQGTEGVEVVVADM-LDL 141
Query: 406 VIALGQYAIVHDKGTYDAIGLNPIDP 483
+ +V +KGT D + ++ DP
Sbjct: 142 PFDRESFDLVIEKGTMDVLFVDSGDP 167
>07_01_0752 -
5783305-5783416,5783739-5783836,5784550-5784675,
5784890-5785090,5785185-5785268,5785519-5785566,
5785709-5785763,5786130-5786185,5786281-5786365,
5786485-5786558,5787093-5787159,5788134-5788216
Length = 362
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 211 GVDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKV 348
GV ++D+GCG G L E+AK ++ G++ E IT +++
Sbjct: 97 GVKPGMKVLDVGCGIGGPLREIAKFSLASVTGLNNNEYQITRGKEL 142
>02_02_0299 -
8726024-8726101,8726460-8726534,8726836-8726965,
8727406-8727601,8727894-8727965,8728087-8728159,
8728240-8728344,8728502-8728624,8728730-8728806,
8729064-8729108,8729214-8729433
Length = 397
Score = 31.9 bits (69), Expect = 0.32
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +1
Query: 208 CGVDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLF 387
C + ++ +G G+G L E+ + G ++ +D CE L V K +P ++
Sbjct: 148 CSIPSPKKVLVIGGGDGGVLREICRHG--SVESIDICEID-QLVIDVCKDFFPDLSVGFK 204
Query: 388 D----ITTDDVIALGQYAIVHDKGTYDAIGLNPIDPKACREKYIEQ 513
D + D + + A +GTYDAI ++ DP ++ +E+
Sbjct: 205 DPRVRLHVGDAVEFLRNA---PEGTYDAIIVDSSDPIGPAQELVEK 247
>05_07_0008 -
27007919-27007944,27008070-27008127,27008218-27008292,
27008417-27008470,27008574-27008840,27008913-27009193,
27009268-27009409,27009491-27009601,27009975-27010013,
27010173-27010310,27010415-27010552,27011438-27011562,
27011702-27011723
Length = 491
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +1
Query: 220 RNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFDITT 399
+ +++LG G G ELAKE ++L +D+ E+ I + ++ I + D+T+
Sbjct: 58 KGKSVLELGAGIGRFTGELAKEA-GHVLALDFIESVIKKNENI-NGHHKNITFMCADVTS 115
Query: 400 DDV 408
D+
Sbjct: 116 PDL 118
>09_02_0548 - 10467342-10468810,10470309-10471632
Length = 930
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 46 IMDETELDPSVLGTREYWKEAYAKEIRNFDEFGDTGDVWFG--EDSALRVIRWICD 207
I+DE +DP +L T + + + I D GD +V E LRV+ W+CD
Sbjct: 314 ILDENGIDPHILRTPAGVRGSELRAI--VDGNGDRHNVRVVVLEGETLRVVTWLCD 367
>11_03_0151 -
10816905-10816977,10817090-10817421,10817884-10817967,
10818045-10818092,10818233-10818287,10818378-10818433,
10818543-10818627,10819810-10819844
Length = 255
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 157 VWFGE---DSALRVIRWIC-DCGVDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVD 312
+W GE +S R ++ G+ + ++D+GCG G L E+A+ ++ G++
Sbjct: 12 IWHGETLRESLKRREHFLALQLGLKKGMKVLDVGCGIGGPLREIARFSSASVTGLN 67
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 232 IIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQN 360
++D+GCG G A+ G + V+ E A T AR++ K N
Sbjct: 87 VMDVGCGTGILSVFCARAGAKCVYAVEASEMA-TQAREIVKAN 128
>04_04_0421 -
25096422-25096594,25096658-25096830,25096918-25096927,
25097230-25097452
Length = 192
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 274 LAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINY 378
LA GFT L+G Y A L R V QN + Y
Sbjct: 76 LALSGFTELIGSPYYVAPEVLHRYVIDQNLRYCTY 110
>03_06_0384 -
33542955-33543024,33543176-33543273,33543445-33543570,
33543974-33544174,33544506-33544616,33544662-33544709,
33544871-33544973,33545009-33545064,33545182-33545266,
33545372-33545445,33545579-33545645,33545854-33545882
Length = 355
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 211 GVDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEA 324
G+ + ++D+GCG G L E+A+ N +Y A
Sbjct: 79 GLKKGMKVLDVGCGIGGPLREIARFRDKNQANYNYSNA 116
>03_01_0254 + 1983806-1984882
Length = 358
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 232 IIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLAR 342
++D+GCG G + +A +N++G+ E + AR
Sbjct: 127 LLDVGCGVGGPMRAIAAHSGSNVVGITINEYQVNRAR 163
>05_01_0035 -
232656-232781,233212-233322,233419-233563,233749-233882,
234341-234412,234485-234548,234632-234699,234894-235129,
236857-237166,237495-238460,238752-238931,239041-239346,
239593-239727,239810-240046,240120-240308,240521-240709,
240929-241024,241117-241323,241700-241893,242979-243216
Length = 1400
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 220 RNSPIIDLGCGNGYTLSELA-KEGFTNLLGVDYCEAAITLA 339
R+ + +LGCGNG+ LA K + + G+D A+ +A
Sbjct: 118 RDKTVAELGCGNGWISIALAEKWSPSKVYGLDINPRAVKIA 158
>04_01_0020 + 307110-307809,308412-308476,309245-309544
Length = 354
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 211 GVDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDY 315
G D S ++D+G G G TL E+ + N+ GV++
Sbjct: 187 GFDGVSVLVDVGGGTGATL-EMITSRYKNITGVNF 220
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,895,140
Number of Sequences: 37544
Number of extensions: 331484
Number of successful extensions: 814
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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