Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326D02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70849-12|AAF99920.2| 236|Caenorhabditis elegans Hypothetical p... 114 4e-26
Z81037-8|CAI79129.1| 217|Caenorhabditis elegans Hypothetical pr... 41 6e-04
U58757-6|AAC47920.1| 656|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z37139-6|CAB63431.2| 591|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical p... 31 0.50
U80030-12|AAG24159.1| 391|Caenorhabditis elegans Hypothetical p... 31 0.50
AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical... 31 0.50
Z54327-1|CAA91119.1| 569|Caenorhabditis elegans Hypothetical pr... 31 0.66
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 30 0.87
Z81038-12|CAB02758.2| 380|Caenorhabditis elegans Hypothetical p... 30 1.2
U41264-11|AAA82431.2| 550|Caenorhabditis elegans Hypothetical p... 30 1.2
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 2.0
U97004-3|AAB52277.1| 365|Caenorhabditis elegans Hypothetical pr... 29 2.0
U10438-8|AAU87835.1| 627|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 29 2.7
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL031633-23|CAA21030.1| 188|Caenorhabditis elegans Hypothetical... 29 2.7
AF003385-6|AAB54246.1| 354|Caenorhabditis elegans Hypothetical ... 29 2.7
Z83234-1|CAB70169.1| 313|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z47358-9|CAA87434.3| 436|Caenorhabditis elegans Hypothetical pr... 28 3.5
AL132904-11|CAC35844.1| 380|Caenorhabditis elegans Hypothetical... 28 4.7
AF049709-1|AAC36062.1| 380|Caenorhabditis elegans tyrosylprotei... 28 4.7
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 27 6.2
Z79697-1|CAB01975.2| 119|Caenorhabditis elegans Hypothetical pr... 27 8.1
U00050-6|AAM22064.1| 208|Caenorhabditis elegans Hypothetical pr... 27 8.1
U00050-5|AAM22063.1| 291|Caenorhabditis elegans Hypothetical pr... 27 8.1
U00034-4|AAA50642.1| 554|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U70849-12|AAF99920.2| 236|Caenorhabditis elegans Hypothetical
protein F29B9.1 protein.
Length = 236
Score = 114 bits (274), Expect = 4e-26
Identities = 53/146 (36%), Positives = 88/146 (60%), Gaps = 9/146 (6%)
Frame = +1
Query: 61 ELDPSVLGTREYWKEAYAKEIRNFDEFGDTGDVWFGEDSALRVIRWICDCGVDRNSPIID 240
E+ S LGT+++W + Y E++NF + GD G+VWFG S R+++++ D +++ I+D
Sbjct: 10 EIASSQLGTKDFWDQRYELELKNFKQHGDEGEVWFGTSSETRIVKYLIDSKTGKDAKILD 69
Query: 241 LGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAK--------QNYPFINYKLFDIT 396
LGCGNG L +L +GF +L GVDYC+ A+ L+ +K + I ++ DIT
Sbjct: 70 LGCGNGSVLRKLRSKGFQSLKGVDYCQKAVDLSAAASKAEREEEEDEELVDIEFEQLDIT 129
Query: 397 TDDV-IALGQYAIVHDKGTYDAIGLN 471
T ++ ++ DKGT+DA+ L+
Sbjct: 130 TPPADFFSSKFDVILDKGTWDAMSLS 155
>Z81037-8|CAI79129.1| 217|Caenorhabditis elegans Hypothetical
protein C17E4.11 protein.
Length = 217
Score = 40.7 bits (91), Expect = 6e-04
Identities = 33/124 (26%), Positives = 54/124 (43%)
Frame = +1
Query: 91 EYWKEAYAKEIRNFDEFGDTGDVWFGEDSALRVIRWICDCGVDRNSPIIDLGCGNGYTLS 270
+YW E + E +NF+ W S L + I ++S I +GCG+
Sbjct: 11 DYWDERFQTE-KNFE--------WL---SGLNAFQHIITPLFSKDSRIAHIGCGSSQVSM 58
Query: 271 ELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFDITTDDVIALGQYAIVHDKGT 450
+L + G+ N+ +DY + I R YP + + DITT + +V +K T
Sbjct: 59 QLWELGYRNITNIDYSQVLIENGR----LEYPNMEWISDDITTLINCESSSFDVVFEKAT 114
Query: 451 YDAI 462
+AI
Sbjct: 115 IEAI 118
>U58757-6|AAC47920.1| 656|Caenorhabditis elegans Hypothetical
protein C01B10.8 protein.
Length = 656
Score = 36.3 bits (80), Expect = 0.013
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 3/154 (1%)
Frame = +1
Query: 67 DPSVLGTREYWKEAYAKEIRNFDEFGDTGDVWFGEDSALRVIRWICDCGVDRNSPIIDLG 246
+P YWK +AK F+ W+G+ ++L + D + + LG
Sbjct: 6 EPQSFTDPAYWKNFFAKRKSPFE--------WYGDYNSLSN---VIDKYLKPKDTFLQLG 54
Query: 247 CGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFDITTDDVIALGQY 426
CGN ++L GF + +D + I + K+ + ++ D + +A +
Sbjct: 55 CGNSELATQLYDNGFHCIHSIDVEPSVIATQIRKNKERLG-MTFETGD-AANLSMADEAH 112
Query: 427 AIVHDKGTYDAIGLNPI---DPKACREKYIEQIH 519
IV DKGT DA+ L P +A K E++H
Sbjct: 113 TIVIDKGTLDAL-LPPSASESDEALVTKMFEEVH 145
>Z37139-6|CAB63431.2| 591|Caenorhabditis elegans Hypothetical
protein C14B1.10 protein.
Length = 591
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 214 VDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARK 345
+ R S + D+GCGNG L + K+G +G D C +ARK
Sbjct: 388 IPRGSVMYDVGCGNGKYL--IPKDGLLK-IGCDMCMGLCDIARK 428
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 172 DSALRVIRWICDCGVDRNSPIIDLGCGNGYTLSEL 276
+SA +V + + GVD NSPI+++ +GY E+
Sbjct: 145 ESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEM 179
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 172 DSALRVIRWICDCGVDRNSPIIDLGCGNGYTLSEL 276
+SA +V + + GVD NSPI+++ +GY E+
Sbjct: 104 ESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEM 138
>Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical
protein Y57G11C.11a protein.
Length = 268
Score = 31.1 bits (67), Expect = 0.50
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Frame = +1
Query: 118 EIRNFDEFGDTGDVWFGE-------DSALRV-IRWICDC--GVDRNSP--IIDLGCGNGY 261
+++ ++FGD W E S R+ + WI D D+ +P ++D+G G G
Sbjct: 29 DVKEVEKFGDLSAEWADELGPFHALHSLNRIRVPWIVDNVRKSDQKAPPRLVDVGSGGGL 88
Query: 262 TLSELAKEGFTNLLGVDYCEAAITLARK 345
LA+ GF ++ G+D + A+ A +
Sbjct: 89 LSIPLARSGF-DVTGIDATKQAVEAANQ 115
>U80030-12|AAG24159.1| 391|Caenorhabditis elegans Hypothetical
protein K12D9.1 protein.
Length = 391
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 232 IIDLGCGNGYTLSELAKE-GFTNLLGVDYCEAAITLAR 342
++D+GCG G+ LA+ + +G+D CE AI A+
Sbjct: 206 VLDVGCGEGFHSCLLAENYSKSQFVGLDICEKAIKSAK 243
>AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical
protein C23H5.1 protein.
Length = 252
Score = 31.1 bits (67), Expect = 0.50
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 232 IIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLAR 342
++D+GCGNG+ + + G + GVD E I + +
Sbjct: 40 VLDVGCGNGHYSFDFLRWGAHKVFGVDNSEEMIQICK 76
>Z54327-1|CAA91119.1| 569|Caenorhabditis elegans Hypothetical
protein C26D10.1 protein.
Length = 569
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 379 KLFDITTDDVIALGQYAIVH-DKGTYDAIGLN 471
K FD+ +V A G + IVH + G Y A GLN
Sbjct: 365 KFFDVVAKNVFASGFWTIVHGEDGKYYAFGLN 396
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +1
Query: 220 RNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAI----TLARKVAKQNYPFINYKLF 387
++ ++D+GCGNG + + G ++G D + I L + + ++ +N F
Sbjct: 37 KDKKVLDIGCGNGLNSTTFLQWGARKVVGFDNSQEMIENCKNLHKSSEQSSFHHLNVTDF 96
Query: 388 DITTDDVIALGQYAI--VHDK 444
+ +A + + VHDK
Sbjct: 97 QLDEKFHVATAVFVLQYVHDK 117
>Z81038-12|CAB02758.2| 380|Caenorhabditis elegans Hypothetical
protein C25A1.3 protein.
Length = 380
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 205 DCGVDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKL 384
D GV+ N ++DL CG G L + G +++ D + +I A + KQ + + +
Sbjct: 50 DNGVN-NPRVLDLACGKGGDLKKWDIAGAKDVVMADVADVSIQQAEERYKQMFGYKKNNI 108
Query: 385 FDI 393
F +
Sbjct: 109 FTV 111
>U41264-11|AAA82431.2| 550|Caenorhabditis elegans Hypothetical
protein F10E7.1 protein.
Length = 550
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 224 FLSTPQSQIHLITRRALSSPNQTSPVSPNS 135
F++ P+ Q HL T+ L P T P+S NS
Sbjct: 330 FITIPE-QFHLFTKERLGDPISTHPISKNS 358
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical protein
C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 2.0
Identities = 25/93 (26%), Positives = 39/93 (41%)
Frame = -1
Query: 311 STPSRFVNPSFANSDSV*PFPQPKSMMGLFLSTPQSQIHLITRRALSSPNQTSPVSPNSS 132
STPSRF+NP A + F KS + F+ Q + +P Q + ++
Sbjct: 767 STPSRFLNPFPAPLPAESFFGNSKSKIAYFIKPTNEQ----PQELFQTPVQIEKIFSSTP 822
Query: 131 KFRISLA*ASFQYSRVPNTDGSNSVSSIISTKV 33
+S A + +D S SV+ I+ KV
Sbjct: 823 SSPVSNAAIIDGMKNISLSDSSTSVAQDIAMKV 855
>U97004-3|AAB52277.1| 365|Caenorhabditis elegans Hypothetical
protein R08E5.3 protein.
Length = 365
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 232 IIDLGCGNGYTLSELAKE-GFTNLLGVDYCEAAITLAR-KVAKQNYPFINYKLFD 390
++D+GCG G+ S LA++ ++ +G+D E AI A+ + K F N + +
Sbjct: 179 VLDVGCGGGFHSSLLAEQYPKSHFVGLDIGEDAIRQAKQRKTKSGAAFNNLEFIE 233
>U10438-8|AAU87835.1| 627|Caenorhabditis elegans Hypothetical
protein B0280.2 protein.
Length = 627
Score = 29.1 bits (62), Expect = 2.0
Identities = 25/93 (26%), Positives = 39/93 (41%)
Frame = -1
Query: 311 STPSRFVNPSFANSDSV*PFPQPKSMMGLFLSTPQSQIHLITRRALSSPNQTSPVSPNSS 132
STPSRF+NP A + F KS + F+ Q + +P Q + ++
Sbjct: 429 STPSRFLNPFPAPLPAESFFGNSKSKIAYFIKPTNEQ----PQELFQTPVQIEKIFSSTP 484
Query: 131 KFRISLA*ASFQYSRVPNTDGSNSVSSIISTKV 33
+S A + +D S SV+ I+ KV
Sbjct: 485 SSPVSNAAIIDGMKNISLSDSSTSVAQDIAMKV 517
>Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical
protein B0001.6 protein.
Length = 674
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = -1
Query: 311 STPSRFVNPSFANSDSV*PFPQPKSMMGLFLSTPQSQIHLITRRALSSPNQTSPVSPNSS 132
S P+R ++ + + ++ P P M +F P+++ R + +S +S SS
Sbjct: 398 SAPARRISSNESRRENPNSQPAPSKMQNVFREDPEAEYKRPERSNADNDETSSTISACSS 457
Query: 131 KFRI 120
K RI
Sbjct: 458 KSRI 461
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -1
Query: 191 ITRRALSSPNQTSPVSPNSSKFRISLA*ASFQYSRVPNTDGSNSVSSIISTKV 33
I +R SS ++S S SK+ I + ++ V TDG ++ ++I+ K+
Sbjct: 696 IIQRVKSSEEKSSSASKRQSKYEIIMNHLERMWTEVRKTDGIMALVNLINCKI 748
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -1
Query: 191 ITRRALSSPNQTSPVSPNSSKFRISLA*ASFQYSRVPNTDGSNSVSSIISTKV 33
I +R SS ++S S SK+ I + ++ V TDG ++ ++I+ K+
Sbjct: 696 IIQRVKSSEEKSSSASKRQSKYEIIMNHLERMWTEVRKTDGIMALVNLINCKI 748
>AL031633-23|CAA21030.1| 188|Caenorhabditis elegans Hypothetical
protein Y39A1A.21a protein.
Length = 188
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 217 DRNSPIIDLGCGNGYTLSELAKEGFTNLLGVD 312
++ +IDLG G+G + + A+EGF N GV+
Sbjct: 61 NKKGTLIDLGSGDGRVVLQCAREGF-NSTGVE 91
>AF003385-6|AAB54246.1| 354|Caenorhabditis elegans Hypothetical
protein R08F11.4 protein.
Length = 354
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 232 IIDLGCGNGYTLSELAKE-GFTNLLGVDYCEAAITLARKVAKQN 360
++D+GCG G+ LA+ + +G+D E AI AR K +
Sbjct: 169 VLDVGCGGGFHSGLLAEHYPKSQFVGLDITEKAIKAARLKKKSD 212
>Z83234-1|CAB70169.1| 313|Caenorhabditis elegans Hypothetical
protein K09E4.3 protein.
Length = 313
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 223 NSPIIDLGCGNGYTLSELAKEGFTNLLGVD 312
N ++D+GCG G+ L KE ++ VD
Sbjct: 46 NPLVLDIGCGVGHIAPHLIKENVGKIIQVD 75
>Z47358-9|CAA87434.3| 436|Caenorhabditis elegans Hypothetical
protein ZK1307.7 protein.
Length = 436
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 207 VADPPYYSEGTVFTEPNVSGITKLIEIPNFFSVS 106
+A P Y E V N +G+T L IP+ FS S
Sbjct: 175 IAKGPMYFEFEVVPNANCTGVTSLTAIPSEFSES 208
>AL132904-11|CAC35844.1| 380|Caenorhabditis elegans Hypothetical
protein Y111B2A.15 protein.
Length = 380
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 52 DETELDPSVLGTREYWKEAYAKEIRNFDEFGDTGDV 159
+ET + P +L R WK++ KE + G TG+V
Sbjct: 99 EETRVIPRILNLRSQWKKS-EKEWNRLQQAGVTGEV 133
>AF049709-1|AAC36062.1| 380|Caenorhabditis elegans tyrosylprotein
sulfotransferase-A protein.
Length = 380
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 52 DETELDPSVLGTREYWKEAYAKEIRNFDEFGDTGDV 159
+ET + P +L R WK++ KE + G TG+V
Sbjct: 99 EETRVIPRILNLRSQWKKS-EKEWNRLQQAGVTGEV 133
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 180 PPSNKVDLRLRGGQKQSHHRLRLWKRLHTI*ISKRRI 290
PPS V+ RG Q+Q + R W+ LH KR I
Sbjct: 332 PPSAAVNNPKRGYQQQQADKARQWETLHRKKDEKRSI 368
>Z79697-1|CAB01975.2| 119|Caenorhabditis elegans Hypothetical
protein F58H10.1 protein.
Length = 119
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 325 AITLARKVAKQNYPFINYKLFDITTDDVIALGQYAIVHDK 444
++ L +A+ Y I+YKL+ D V Y ++ DK
Sbjct: 12 SVLLTSTIARPQYKDIDYKLYGDGDDGVAVDAVYEVISDK 51
>U00050-6|AAM22064.1| 208|Caenorhabditis elegans Hypothetical
protein F09F7.7b protein.
Length = 208
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +1
Query: 352 KQNY-PFINYKLFDITTDDVIALGQYA--IVHDKGTYDAIGLNPIDP-KACREKYIE 510
KQ+Y P +N+K + TD + + +YA +++ YD L P + C +Y E
Sbjct: 119 KQDYGPKVNFKHKKVKTDTFVGMPEYADMLLNKMSEYDVKKLGNYQPFEMCNLEYEE 175
>U00050-5|AAM22063.1| 291|Caenorhabditis elegans Hypothetical
protein F09F7.7a protein.
Length = 291
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +1
Query: 352 KQNY-PFINYKLFDITTDDVIALGQYA--IVHDKGTYDAIGLNPIDP-KACREKYIE 510
KQ+Y P +N+K + TD + + +YA +++ YD L P + C +Y E
Sbjct: 119 KQDYGPKVNFKHKKVKTDTFVGMPEYADMLLNKMSEYDVKKLGNYQPFEMCNLEYEE 175
>U00034-4|AAA50642.1| 554|Caenorhabditis elegans Hypothetical
protein C06E8.5 protein.
Length = 554
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -2
Query: 166 RTKRLRYHQTHRNSEFL*RKPLSSTHEFLIRTGL-IPFHPLFRL 38
R+ R+ + ++ FL R+ L ++R G+ IP HPLF+L
Sbjct: 476 RSPRILLQEELDDAGFLSREILQRMVNDILRQGIPIPIHPLFKL 519
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,781,996
Number of Sequences: 27780
Number of extensions: 282290
Number of successful extensions: 733
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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