Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326D01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical... 153 7e-38
AL117203-11|CAB55116.1| 126|Caenorhabditis elegans Hypothetical... 42 3e-04
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 41 6e-04
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 41 6e-04
AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical ... 38 0.006
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 36 0.023
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 36 0.023
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.38
U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical pr... 31 0.38
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 0.38
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 31 0.66
AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical ... 29 2.7
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 28 3.5
U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical p... 28 4.7
U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical p... 28 4.7
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 27 6.2
U88183-3|AAB52656.2| 593|Caenorhabditis elegans Warthog (hedgeh... 27 6.2
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 27 6.2
Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 27 8.1
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 27 8.1
AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate cyc... 27 8.1
AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble guany... 27 8.1
AF016670-6|AAB66103.2| 839|Caenorhabditis elegans Hypothetical ... 27 8.1
>AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical
protein Y110A2AL.13 protein.
Length = 168
Score = 153 bits (371), Expect = 7e-38
Identities = 79/155 (50%), Positives = 101/155 (65%), Gaps = 10/155 (6%)
Frame = +3
Query: 81 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGGPASXXXXXXXXXXGGIPKEVRCSHLLV 260
LP GWE R+SRS YY N T +SQWE+P A G K V+C HLLV
Sbjct: 6 LPAGWEKRQSRSNDRVYYFNTATGRSQWERPDESA--------FGKGSELKSVQCLHLLV 57
Query: 261 KHSGSRRPSSWREEHITRTKEEALDILQE-------YRRKIIDR---EAKFEELASTYSD 410
KH GSR PSSWR +HITR+K++A++IL+ Y +++ D E KF ELA +SD
Sbjct: 58 KHDGSRNPSSWRSDHITRSKDDAINILKSADLRNFHYEKELKDASNIEGKFRELAKQFSD 117
Query: 411 CSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLS 515
CSSAKR GDLG F++ QMQKPFED +F+L+IG++S
Sbjct: 118 CSSAKRGGDLGPFERRQMQKPFEDASFALEIGEMS 152
>AL117203-11|CAB55116.1| 126|Caenorhabditis elegans Hypothetical
protein Y48C3A.16 protein.
Length = 126
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 378 KFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQP 521
KF E+A+ YS+ A+ GDLG +G M PF+D AF+L +P
Sbjct: 58 KFNEVAAQYSE-DKARSGGDLGWMTRGSMVGPFQDAAFALSNSSCDKP 104
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 33 FPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 173
F Q+ N A LPEGWE R+ +T Y++N + +QWE P
Sbjct: 310 FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 60 ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 173
A+ EE LP+GWE R + G YY++ TK + WE+P
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250
Score = 35.5 bits (78), Expect = 0.023
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 48 TNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 173
T + STQ LP+GWE R+ G YY++ +T+ + W++P
Sbjct: 246 TWERPSTQP--LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 33 FPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 173
F Q+ N A LPEGWE R+ +T Y++N + +QWE P
Sbjct: 310 FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 60 ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 173
A+ EE LP+GWE R + G YY++ TK + WE+P
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250
Score = 35.5 bits (78), Expect = 0.023
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 48 TNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 173
T + STQ LP+GWE R+ G YY++ +T+ + W++P
Sbjct: 246 TWERPSTQP--LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical
protein Y40B1A.2 protein.
Length = 120
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 90 GWEARKSRSTGMTYYLNKHTKKSQWEKPG-GPASXXXXXXXXXXGGIPKEVR 242
GW + S S+G YY NK T+ SQW+KP PA GG+ ++ R
Sbjct: 10 GWTEQMS-SSGKMYYYNKKTEISQWDKPAEWPAEGGSAERDKPKGGVNEKPR 60
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 35.5 bits (78), Expect = 0.023
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 15 RKNLLAFPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKP 173
+K + +R N+ + ++E L + W KS + G TYY NK TK++QW P
Sbjct: 1323 QKEAIKAACRRANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1377
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 35.5 bits (78), Expect = 0.023
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 15 RKNLLAFPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKP 173
+K + +R N+ + ++E L + W KS + G TYY NK TK++QW P
Sbjct: 1337 QKEAIKAACRRANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1391
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.38
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 51 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 173
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.38
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 51 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 173
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical
protein ZC239.6 protein.
Length = 258
Score = 31.5 bits (68), Expect = 0.38
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 330 LDILQEYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDV 485
+D+ QEY +++ REA+F L DC A D+G + + P D+
Sbjct: 61 VDLPQEYLNQLL-REARFYGLVKLVRDCEQAIARLDVGSGRPSERADPLSDI 111
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.38
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 51 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 173
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 31.1 bits (67), Expect = 0.50
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 81 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGG 179
LP GWE ++ G T+Y++ +K+Q+E+P G
Sbjct: 332 LPPGWEQVDDQNYG-TFYVDHINRKTQYERPYG 363
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 30.7 bits (66), Expect = 0.66
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 120 GMTYYLNKHTKKSQWEKPGG 179
G YY N TKK+QW KP G
Sbjct: 137 GKPYYYNTLTKKTQWVKPDG 156
>AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical
protein Y92H12BM.1 protein.
Length = 157
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 93 WEARKSRSTGMTYYLNKHTKKSQWEKPGG 179
WE S+ TG YY N + ++W+KP G
Sbjct: 9 WELFDSK-TGRYYYYNASSSVTKWQKPTG 36
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 240 RCSHLLVKHSGSRRPSSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCS- 416
+C L +K + + + + ++R ++E L+ + ++ + +A EE+ + Y D +
Sbjct: 24 KCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQ 83
Query: 417 SAKR-DGDLGRFKK 455
A+R G+L KK
Sbjct: 84 KAERIQGELEESKK 97
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 240 RCSHLLVKHSGSRRPSSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCS- 416
+C L +K + + + + ++R ++E L+ + ++ + +A EE+ + Y D +
Sbjct: 24 KCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQ 83
Query: 417 SAKR-DGDLGRFKK 455
A+R G+L KK
Sbjct: 84 KAERIQGELEESKK 97
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 345 EYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQ 461
E R+K I+ + K EE D A+RD + R K+ +
Sbjct: 205 EARKKYIETQKKAEENEEKRRDAQKAERDAHIARHKQAE 243
>U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical
protein T02G5.13b protein.
Length = 298
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 351 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQK 470
R I+D+E+ E +S Y + GDL R ++ QM+K
Sbjct: 207 RSSIMDKESVSEVCSSLYEFWDTIGESGDLERRRQDQMKK 246
>U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical
protein T02G5.13a protein.
Length = 399
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 351 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQK 470
R I+D+E+ E +S Y + GDL R ++ QM+K
Sbjct: 308 RSSIMDKESVSEVCSSLYEFWDTIGESGDLERRRQDQMKK 347
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 279 RPSSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCSSAKR 428
R +SWR + KEE+ + L Y R + ++F L S SA R
Sbjct: 389 RSNSWRARPCSILKEESEEELSSYLRSASRQSSRFYPLHDFVSSPRSASR 438
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 279 RPSSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCSSAKR 428
R +SWR + KEE+ + L Y R + ++F L S SA R
Sbjct: 389 RSNSWRARPCSILKEESEEELSSYLRSASRQSSRFYPLHDFVSSPRSASR 438
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 297 EEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCSSAKR 428
E + K E + + +E RRK + E K + Y D + KR
Sbjct: 94 EAQLANMKSEHIRVAEEERRKTLGEETKHAHSRAEYQDQLARKR 137
>U88183-3|AAB52656.2| 593|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 6 protein.
Length = 593
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 300 EHITRTKEEALDILQEYRRKIIDREAKFEE 389
E + + EEAL +L RRK+ DR K+++
Sbjct: 170 EATSDSSEEALPLLSRNRRKLRDRVGKYDD 199
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 129 YYLNKHTKKSQWEKPGGP 182
++ K K SQW +PGGP
Sbjct: 564 FFQQKFYKNSQWARPGGP 581
>Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical
protein C06B3.8 protein.
Length = 646
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 57 MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWE 167
M + + E P G K R TY+L + KKS WE
Sbjct: 563 METGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWE 599
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 300 EHITRTKEEALDILQEYRRKIIDREAKFE-ELASTYSDCSSAKRDGDLGRFKKGQMQ 467
E+ R EEA+D+L+ K++ + +F +L S+ + + K+ KKG+ +
Sbjct: 234 ENRGRILEEAVDVLKSENEKLLAKNEEFSAKLVSSEKEFAEFKKKSHFVLEKKGKQE 290
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 300 EHITRTKEEALDILQEYRRKIIDREAKFE-ELASTYSDCSSAKRDGDLGRFKKGQMQ 467
E+ R EEA+D+L+ K++ + +F +L S+ + + K+ KKG+ +
Sbjct: 236 ENRGRILEEAVDVLKSENEKLLAKNEEFSAKLVSSEKEFAEFKKKSHFVLEKKGKQE 292
>AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 684
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 57 MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWE 167
M + + E P G K R TY+L + KKS WE
Sbjct: 601 METGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWE 637
>AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble
guanylate cyclase protein.
Length = 684
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 57 MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWE 167
M + + E P G K R TY+L + KKS WE
Sbjct: 601 METGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWE 637
>AF016670-6|AAB66103.2| 839|Caenorhabditis elegans Hypothetical
protein K02F6.3 protein.
Length = 839
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 285 SSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCS-SAK 425
S W E I +++LDIL+EY ++ E+ +T++ SAK
Sbjct: 319 SDWFVEKIAVNDQKSLDILKEYLSAFDRMSSQIVEIGATFTSLQPSAK 366
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,693,446
Number of Sequences: 27780
Number of extensions: 223500
Number of successful extensions: 685
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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