Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326C10f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 31 0.50
AF000299-7|AAC47982.1| 168|Caenorhabditis elegans Hypothetical ... 29 2.0
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 28 3.5
Z49911-10|CAA90134.1| 471|Caenorhabditis elegans Hypothetical p... 28 4.7
Z49909-18|CAA90117.1| 471|Caenorhabditis elegans Hypothetical p... 28 4.7
Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical p... 27 6.2
AF099915-7|AAU05581.1| 468|Caenorhabditis elegans Hypothetical ... 27 6.2
AF099915-6|AAU05582.1| 471|Caenorhabditis elegans Hypothetical ... 27 6.2
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/109 (18%), Positives = 45/109 (41%)
Frame = -1
Query: 509 TKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIEKQVIL 330
T ++ PP ++ T + + P++D+SFF +PP+ ++ + + +VI
Sbjct: 176 TLVLPPTKPPGDDVTTGSRGFLTPTHSTPALDMSFF-TPPRQMRTLADAVREAAPVEVIP 234
Query: 329 XXXXXXXXXXVALPPKPTITIESSDEDELEVIQSPSPAKILTKPVSGER 183
ALP + + + + + + P ++PVS +
Sbjct: 235 EFVEPDPPVQDALPDEIMEPVSLTPIKKPKTEKEPEKEIPASEPVSSPK 283
>AF000299-7|AAC47982.1| 168|Caenorhabditis elegans Hypothetical
protein E03H12.7 protein.
Length = 168
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = -1
Query: 491 ESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIEKQ 339
+SP + + AA KPV +++ P P F+ P ++ K+ ++ E+E++K+
Sbjct: 84 KSPAPDGDAAAAKPVDQSQKPFPK-----FEMPTESKKKK-KMAENEVDKK 128
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 287 PKPTITIESSDEDELEVIQSPSPAK 213
P I ++ D+DE++ I +P+PAK
Sbjct: 199 PVECIELDDDDDDEIQEISTPAPAK 223
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 287 PKPTITIESSDEDELEVIQSPSPAK 213
P I ++ D+DE++ I +P+PAK
Sbjct: 199 PVECIELDDDDDDEIQEISTPAPAK 223
>Z49911-10|CAA90134.1| 471|Caenorhabditis elegans Hypothetical
protein C14A4.13 protein.
Length = 471
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -1
Query: 515 SNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLS 408
S+ II+KE PP A KPV K P+P V +S
Sbjct: 367 SDDTIIEKEGPP-----PAPKPVSKPVPPKPGVTMS 397
>Z49909-18|CAA90117.1| 471|Caenorhabditis elegans Hypothetical
protein C14A4.13 protein.
Length = 471
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -1
Query: 515 SNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLS 408
S+ II+KE PP A KPV K P+P V +S
Sbjct: 367 SDDTIIEKEGPP-----PAPKPVSKPVPPKPGVTMS 397
>Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 27.5 bits (58), Expect = 6.2
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +2
Query: 239 LLVHLHQSFQWL*SALVVEPLPQPHPHRLIPGSPVFQFHARLPQWFFLNFGAEIGKRISQ 418
+L HL SF + S V P+P L +PV AR W +N G +
Sbjct: 251 VLSHLVSSFDYKGSEGNVHVTMLPNPSHLEAVNPVAMGKARARAW-SMNKG-DYSPDERS 308
Query: 419 QKAGDSQLLVLV-----FWLQYCCWQVATLSE 499
+AGDS L VLV F Q W+ LS+
Sbjct: 309 ARAGDSVLNVLVHGDGAFTGQGVVWESIALSQ 340
>Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 27.5 bits (58), Expect = 6.2
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +2
Query: 239 LLVHLHQSFQWL*SALVVEPLPQPHPHRLIPGSPVFQFHARLPQWFFLNFGAEIGKRISQ 418
+L HL SF + S V P+P L +PV AR W +N G +
Sbjct: 251 VLSHLVSSFDYKGSEGNVHVTMLPNPSHLEAVNPVAMGKARARAW-SMNKG-DYSPDERS 308
Query: 419 QKAGDSQLLVLV-----FWLQYCCWQVATLSE 499
+AGDS L VLV F Q W+ LS+
Sbjct: 309 ARAGDSVLNVLVHGDGAFTGQGVVWESIALSQ 340
>AF099915-7|AAU05581.1| 468|Caenorhabditis elegans Hypothetical
protein E02H9.3a protein.
Length = 468
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 497 QKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQN 384
QK+ PANNN A PK + + + FQ P ++
Sbjct: 263 QKQVTPANNNKVAGSGFPKPPKKEEKIVGTGFQPPKKD 300
>AF099915-6|AAU05582.1| 471|Caenorhabditis elegans Hypothetical
protein E02H9.3b protein.
Length = 471
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 497 QKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQN 384
QK+ PANNN A PK + + + FQ P ++
Sbjct: 266 QKQVTPANNNKVAGSGFPKPPKKEEKIVGTGFQPPKKD 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,426,505
Number of Sequences: 27780
Number of extensions: 265110
Number of successful extensions: 951
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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