Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326C09f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084197-27|AAG23467.2|  314|Caenorhabditis elegans Hypothetical...    28   3.5  
AC006604-1|AAF39751.1|  484|Caenorhabditis elegans Hypothetical ...    27   8.1  

>AC084197-27|AAG23467.2|  314|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.21 protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 367 KDWQSASRLRQGRSLAQFVCNLYSVSCL 450
           KDW+S  RL       +F+C+L++  CL
Sbjct: 74  KDWESLLRLNCHPDTQRFLCSLFAPVCL 101


>AC006604-1|AAF39751.1|  484|Caenorhabditis elegans Hypothetical
           protein C07F11.2 protein.
          Length = 484

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -1

Query: 242 EKNDLQLNSRACKASLVAMFFGDEKFGKDVFFSLFFNVITF 120
           E NDL +  RAC+  L +     +  G  +   L FN I F
Sbjct: 362 ELNDLPVLKRACERYLCSELNSKKDIGTCLLLDLLFNSIVF 402


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,202,861
Number of Sequences: 27780
Number of extensions: 212242
Number of successful extensions: 483
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)