Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326C06f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL034364-3|CAA22253.1| 162|Caenorhabditis elegans Hypothetical ... 45 3e-05
Z79754-2|CAB02091.1| 578|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF036705-3|AAB95171.1| 556|Caenorhabditis elegans Hypothetical ... 27 6.2
U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical pr... 27 8.1
U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical ... 27 8.1
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +2
Query: 14 RRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLRVA 193
RRY F+ +H+ L Y + IPPLPEK+V + + + ++ R+ L+ ++ ++
Sbjct: 262 RRYKHFDWLHEQLSAKYVLIPIPPLPEKQV------AGRYEEDLIDHRKHILQLWVNKIC 315
Query: 194 SHPRLCFDDQFINFLQ--EEHGWR 259
HP L + +++F+ +E W+
Sbjct: 316 RHPVLSQSEVWLHFISCTDEKDWK 339
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +2
Query: 14 RRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLRVA 193
RRY F+ +H+ L Y + IPPLPEK+V + + + ++ R+ L+ ++ ++
Sbjct: 264 RRYKHFDWLHEQLSAKYVLIPIPPLPEKQV------AGRYEEDLIDHRKHILQLWVNKIC 317
Query: 194 SHPRLCFDDQFINFLQ--EEHGWR 259
HP L + +++F+ +E W+
Sbjct: 318 RHPVLSQSEVWLHFISCTDEKDWK 341
>AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical
protein Y37A1B.2b protein.
Length = 592
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +2
Query: 14 RRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLRVA 193
RRY F+ +H+ L Y + IPPLPEK+V + + + ++ R+ L+ ++ ++
Sbjct: 290 RRYKHFDWLHEQLSAKYVLIPIPPLPEKQV------AGRYEEDLIDHRKHILQLWVNKIC 343
Query: 194 SHPRLCFDDQFINFLQ--EEHGWR 259
HP L + +++F+ +E W+
Sbjct: 344 RHPVLSQSEVWLHFISCTDEKDWK 367
>AL034364-3|CAA22253.1| 162|Caenorhabditis elegans Hypothetical
protein W06D4.5 protein.
Length = 162
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +2
Query: 2 STIWRRYTEFEQIHDYLQVTYPHVVIPPLPEK--RVLYAWRKSDTT-DPEFVERRRAGLE 172
S++ RRY++FE + L+ +V+P LP K + +R D + EF+E RR LE
Sbjct: 65 SSVRRRYSDFEWVRAELERD-SKIVVPTLPGKSFKRQLPFRSDDGIFEEEFIENRRKALE 123
Query: 173 NFLLRVASHPRLCFDDQFINFLQE 244
F+ +VA HP + FLQE
Sbjct: 124 LFINKVAGHPLAQNERSLHIFLQE 147
>Z79754-2|CAB02091.1| 578|Caenorhabditis elegans Hypothetical
protein F25H2.2 protein.
Length = 578
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 14 RRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLRVA 193
RRY+EF ++H L+ + P LP K + ++ S+ + ++ RR GLE +L ++
Sbjct: 201 RRYSEFVELHLALKKHFYDYCFPQLPGK---WPFKLSE----QQLDSRRRGLEQYLEKIC 253
Query: 194 SHPRLCFDDQFINFLQE 244
+ + + FL E
Sbjct: 254 TIRVIAESELVQKFLME 270
>Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical
protein F23B2.10 protein.
Length = 393
Score = 28.3 bits (60), Expect = 3.5
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +2
Query: 167 LENFLLRVASHPRLCFDDQFINFLQEEHGWRETITDSGYLLQAENKIKSLSVSIRLKKPD 346
LE +LR+ S +C D N L+E+ + I + +A N + S S +K+ +
Sbjct: 136 LETIILRIKSIG-ICADCVINNGLKEDVVMMKNIKRLYDIAKALNYLSMFSFS--MKQIE 192
Query: 347 PEVESFKNYGKQL 385
E+E FKN QL
Sbjct: 193 REIEEFKNKKNQL 205
>AF036705-3|AAB95171.1| 556|Caenorhabditis elegans Hypothetical
protein F37C4.5a protein.
Length = 556
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 146 VERRRAGLENFLLRVASHPR---LCFDDQFINFLQEEHGWRETIT 271
V++R GL+N + VA H + FD + I L HG+ + T
Sbjct: 114 VQKRIEGLDNLITEVAKHGKDGAFHFDGRTIESLNALHGFHQDTT 158
>U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical
protein M03D4.4b protein.
Length = 456
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 329 RLKKPDPEVESFKNYGKQLETNLGNFL 409
++ K D E E++K KQ+ N+ NFL
Sbjct: 405 QMVKKDEEFENYKQMTKQIIANVSNFL 431
>U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical
protein M03D4.4a protein.
Length = 505
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 329 RLKKPDPEVESFKNYGKQLETNLGNFL 409
++ K D E E++K KQ+ N+ NFL
Sbjct: 454 QMVKKDEEFENYKQMTKQIIANVSNFL 480
>AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical
protein Y105C5A.15 protein.
Length = 737
Score = 27.1 bits (57), Expect = 8.1
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RETITDSGYLLQAEN-KIKSLSVSIRLKKPDPEVESFKNYGKQLETNLGNFLYTRSKIIE 433
RE I D LL N + L I K D +E+FK +L F+ + IE
Sbjct: 495 REDIFDVHNLLAEWNDQWGQLEQIISTKCADTLLENFKKLDPTHMRDLEVFILPFRETIE 554
Query: 434 KNYALCKLHANYGKLFSEWSVIEKE 508
+L H N+ K+ EW ++ E
Sbjct: 555 ---SLTSEHPNFHKILPEWLALQHE 576
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,126,562
Number of Sequences: 27780
Number of extensions: 282400
Number of successful extensions: 653
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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