Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326C01f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 29 0.033
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 2.9
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 2.9
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 22 3.8
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 6.6
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 21 6.6
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 21 6.6
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 8.7
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 28.7 bits (61), Expect = 0.033
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 291 YAHTPGTTIELTCEAAGSPAPSVHWFKND 377
+++T G +E C A G+P P + W ++D
Sbjct: 35 FSNTTGAVVE--CSAHGNPTPDIIWVRSD 61
Score = 28.7 bits (61), Expect = 0.033
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 303 PGTTIELTCEAAGSPAPSVHW 365
PG ++ L C A+G+P P + W
Sbjct: 427 PGNSVFLKCIASGNPTPEITW 447
Score = 27.1 bits (57), Expect = 0.10
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 315 IELTCEAAGSPAPSVHWFK 371
+ L C A G P+PS W+K
Sbjct: 250 VALLCPAQGFPSPSFRWYK 268
Score = 25.4 bits (53), Expect = 0.31
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +3
Query: 306 GTTIELTCEAAGSPAPSVHWFKNDSPV 386
G TC G+P ++ W K+ P+
Sbjct: 342 GRPATFTCNFEGNPIKTISWLKDGHPI 368
Score = 22.6 bits (46), Expect = 2.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 294 AHTPGTTIELTCEAAGSPAPSVHW 365
A G+ + C+A G P P V W
Sbjct: 709 AFAQGSDAAVECKADGFPRPVVTW 732
Score = 22.2 bits (45), Expect = 2.9
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +3
Query: 306 GTTIELTCEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQ 485
G T+ + C AG P SV W ++ + + + + + T I V R + Q
Sbjct: 525 GGTLIVHCPFAGHPVDSVVWERDGR---QLPINRKQKVFINGTLIIE-----NVERASDQ 576
Query: 486 DVYTCLATTS 515
Y C+A S
Sbjct: 577 ATYDCVAKNS 586
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 315 IELTCEAAGSPAPSVHW 365
+ L C A G P P + W
Sbjct: 1324 VTLPCLAVGLPPPVITW 1340
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 2.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 310 VPGVCAYDGRGPCVIDKYL 254
VPGV A R PC I++ L
Sbjct: 197 VPGVVAMFSRKPCSINENL 215
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 2.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 310 VPGVCAYDGRGPCVIDKYL 254
VPGV A R PC I++ L
Sbjct: 197 VPGVVAMFSRKPCSINENL 215
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3
Query: 429 PTSIARISSTLI 464
PTS+ +ISSTL+
Sbjct: 75 PTSVTKISSTLL 86
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 6.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 423 SSPTSIARISSTLIVTRTTSQDVYTCLATTSS 518
+SP S++ T TTSQ++ + ++TSS
Sbjct: 144 TSPLSVSTSPPGKPATSTTSQNLSSPASSTSS 175
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 464 SDAYDLSGCVHLPRH 508
S AYD S C + P H
Sbjct: 341 SSAYDASSCGYDPMH 355
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 252 HKYLSITQGPLPSYAHTPGT 311
H+Y T PLPS H+ T
Sbjct: 392 HQYGYNTLSPLPSSVHSHST 411
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 20.6 bits (41), Expect = 8.7
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +3
Query: 243 DGSHKYLSITQGPLPSYAHTPGTTIELTCEAA 338
D KYL + + Y H P T E AA
Sbjct: 440 DYIRKYLPVLKNMPSQYIHEPWTAPEQVQRAA 471
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,915
Number of Sequences: 336
Number of extensions: 2115
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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