Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326C01f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 32 0.004
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 32 0.004
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 31 0.005
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 30 0.013
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 27 0.12
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 4.4
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 31.9 bits (69), Expect = 0.004
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 303 PGTTIELTCEAAGSPAPSVHW 365
PG + L C AAG+P P V W
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTW 455
Score = 25.8 bits (54), Expect = 0.27
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 282 LPSYAHTPGTTIELTCEAAGSPAPSVHW 365
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 25.0 bits (52), Expect = 0.47
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 315 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIV-TRTTSQD 488
+ L C+A G P P++ W K S EY+ EL + + T I + L+ + +
Sbjct: 727 VALHCQAQGVPTPTIVWKKATGSKSGEYE----ELRERAYTKILSNGTLLLQHVKEDREG 782
Query: 489 VYTCLAT 509
Y C A+
Sbjct: 783 FYLCQAS 789
Score = 23.0 bits (47), Expect = 1.9
Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Frame = +3
Query: 240 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHWFKNDS-PVYE 392
S G H + + +GP S+ P + +E L C A GSP ++ W D PV
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTADGHPV-- 72
Query: 393 YDVESNELIDSSPTSIARISSTLIVTRTTSQDVYTCLATTS 515
DV + + T + + Y C+A+ S
Sbjct: 73 NDVPGVRRVLRNGTLVLLPFPAAAFRQDVHSAAYRCVASNS 113
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 306 GTTIELTCEAAGSPAPSVHWFK 371
G T L CE G +V W K
Sbjct: 822 GDTATLHCEVHGDTPVTVTWLK 843
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 31.9 bits (69), Expect = 0.004
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 303 PGTTIELTCEAAGSPAPSVHW 365
PG + L C AAG+P P V W
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTW 455
Score = 25.8 bits (54), Expect = 0.27
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 282 LPSYAHTPGTTIELTCEAAGSPAPSVHW 365
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 25.0 bits (52), Expect = 0.47
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 315 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIV-TRTTSQD 488
+ L C+A G P P++ W K S EY+ EL + + T I + L+ + +
Sbjct: 723 VALHCQAQGVPTPTIVWKKATGSKSGEYE----ELRERAYTKILSNGTLLLQHVKEDREG 778
Query: 489 VYTCLAT 509
Y C A+
Sbjct: 779 FYLCQAS 785
Score = 23.0 bits (47), Expect = 1.9
Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Frame = +3
Query: 240 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHWFKNDS-PVYE 392
S G H + + +GP S+ P + +E L C A GSP ++ W D PV
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTADGHPV-- 72
Query: 393 YDVESNELIDSSPTSIARISSTLIVTRTTSQDVYTCLATTS 515
DV + + T + + Y C+A+ S
Sbjct: 73 NDVPGVRRVLRNGTLVLLPFPAAAFRQDVHSAAYRCVASNS 113
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 306 GTTIELTCEAAGSPAPSVHWFK 371
G T L CE G +V W K
Sbjct: 818 GDTATLHCEVHGDTPVTVTWLK 839
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 31.5 bits (68), Expect = 0.005
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 321 LTCEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIAR 446
+ C AG P P V W KND + + +LI + I +
Sbjct: 421 IRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIK 462
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 30.3 bits (65), Expect = 0.013
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 303 PGTTIELTCEAAGSPAPSVHW---FKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTR 473
PG ++ L C A+G+P P + W K S V ++ S ISS T
Sbjct: 407 PGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISS----TH 462
Query: 474 TTSQDVYTCLATT 512
T +Y C+A +
Sbjct: 463 TNDGGLYKCIAAS 475
Score = 26.6 bits (56), Expect = 0.15
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 306 GTTIELTCEAAGSPAPSVHWFKND 377
GT + C+A G+P P + W + D
Sbjct: 18 GTGAVVECQARGNPQPDIIWVRAD 41
Score = 26.2 bits (55), Expect = 0.20
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +3
Query: 315 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQD- 488
+ L C A G P P W+K + V+ NE + ++S TLI+ +D
Sbjct: 230 LPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNE-------RVRQVSGTLIIREARVEDS 282
Query: 489 -VYTCLATTS 515
Y C+ S
Sbjct: 283 GKYLCIVNNS 292
Score = 26.2 bits (55), Expect = 0.20
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 306 GTTIELTCEAAGSPAPSVHWFKNDSPV 386
G TC G+P +V W K+ P+
Sbjct: 322 GRPATFTCNVRGNPIKTVSWLKDGKPL 348
Score = 25.0 bits (52), Expect = 0.47
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 294 AHTPGTTIELTCEAAGSPAPSVHWFK--NDSP 383
A G+ + C+A G P P V W K D+P
Sbjct: 689 AFAQGSDARVECKADGFPKPQVTWKKAAGDTP 720
Score = 25.0 bits (52), Expect = 0.47
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 315 IELTCEAAGSPAPSVHW 365
++L C A G PAP V W
Sbjct: 1294 VKLPCLAVGVPAPEVTW 1310
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 27.1 bits (57), Expect = 0.12
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 306 GTTIELTCEAAGSPAPSVHWFKNDSPVYEY 395
G I C A G P P + W K+ +Y +
Sbjct: 37 GRKITFFCMATGFPRPEITWLKDGIELYHH 66
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -2
Query: 88 DSRRKNSFFAKSIRNSLRFSENRIKSSI 5
+ +++ +F +RN L EN+ KS++
Sbjct: 89 NDKKEENFIVDRLRNDLFECENKEKSNV 116
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,109
Number of Sequences: 438
Number of extensions: 2465
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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