Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326B12f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sortin... 136 3e-32
AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sortin... 136 3e-32
AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sortin... 136 3e-32
AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein. 136 3e-32
AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein. 136 3e-32
AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protei... 133 4e-31
AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein. 121 1e-27
BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sortin... 120 3e-27
AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing... 120 3e-27
AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sortin... 120 3e-27
AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein. 120 3e-27
BC009692-1|AAH09692.1| 81|Homo sapiens VPS4B protein protein. 105 7e-23
BC004540-1|AAH04540.1| 541|Homo sapiens RPS6KL1 protein protein. 42 0.001
AC006530-3|AAD30182.1| 549|Homo sapiens unknown protein. 42 0.001
BC056202-1|AAH56202.1| 813|Homo sapiens calpain 7 protein. 40 0.005
AB028639-1|BAA78730.1| 813|Homo sapiens PalBH protein. 40 0.005
BC104769-1|AAI04770.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.009
AL645860-2|CAH70704.1| 1054|Homo sapiens ribosomal protein S6 ki... 39 0.009
AL645860-1|CAH70703.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.009
AL583826-2|CAH73805.1| 1054|Homo sapiens ribosomal protein S6 ki... 39 0.009
AL583826-1|CAH73804.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.009
AL512449-2|CAH72000.1| 1054|Homo sapiens ribosomal protein S6 ki... 39 0.009
AL512449-1|CAH71999.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.009
AK054800-1|BAB70808.1| 255|Homo sapiens protein ( Homo sapiens ... 39 0.009
AF477978-1|AAL84818.1| 1066|Homo sapiens RSK-like protein protein. 39 0.009
AB070706-1|BAB63956.1| 1066|Homo sapiens RSK-like protein protein. 38 0.028
>BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sorting 4
homolog A (S. cerevisiae) protein.
Length = 437
Score = 136 bits (330), Expect = 3e-32
Identities = 71/132 (53%), Positives = 84/132 (63%)
Frame = +3
Query: 87 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 266
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 267 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 446
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 447 EKPHVKWSDVAG 482
EKP+++W+DVAG
Sbjct: 120 EKPNIRWNDVAG 131
>AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sorting
factor 4A protein.
Length = 437
Score = 136 bits (330), Expect = 3e-32
Identities = 71/132 (53%), Positives = 84/132 (63%)
Frame = +3
Query: 87 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 266
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 267 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 446
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 447 EKPHVKWSDVAG 482
EKP+++W+DVAG
Sbjct: 120 EKPNIRWNDVAG 131
>AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sorting
VPS4-1 protein.
Length = 437
Score = 136 bits (330), Expect = 3e-32
Identities = 71/132 (53%), Positives = 84/132 (63%)
Frame = +3
Query: 87 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 266
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 267 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 446
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 447 EKPHVKWSDVAG 482
EKP+++W+DVAG
Sbjct: 120 EKPNIRWNDVAG 131
>AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein.
Length = 437
Score = 136 bits (330), Expect = 3e-32
Identities = 71/132 (53%), Positives = 84/132 (63%)
Frame = +3
Query: 87 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 266
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 267 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 446
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 447 EKPHVKWSDVAG 482
EKP+++W+DVAG
Sbjct: 120 EKPNIRWNDVAG 131
>AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein.
Length = 437
Score = 136 bits (330), Expect = 3e-32
Identities = 71/132 (53%), Positives = 84/132 (63%)
Frame = +3
Query: 87 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 266
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 267 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 446
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEEHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 447 EKPHVKWSDVAG 482
EKP+++W+DVAG
Sbjct: 120 EKPNIRWNDVAG 131
>AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protein 4
protein.
Length = 432
Score = 133 bits (321), Expect = 4e-31
Identities = 67/126 (53%), Positives = 79/126 (62%)
Frame = +3
Query: 105 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 284
LQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAKC+QYLD
Sbjct: 1 LQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLD 60
Query: 285 RAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVVEKPHVK 464
RA LQ +L GA+V+EKP+++
Sbjct: 61 RAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIR 120
Query: 465 WSDVAG 482
W+DVAG
Sbjct: 121 WNDVAG 126
>AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein.
Length = 437
Score = 121 bits (292), Expect = 1e-27
Identities = 66/123 (53%), Positives = 75/123 (60%)
Frame = +3
Query: 87 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 266
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 267 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 446
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEEHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 447 EKP 455
EKP
Sbjct: 120 EKP 122
>BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sorting 4
homolog B (S. cerevisiae) protein.
Length = 444
Score = 120 bits (289), Expect = 3e-27
Identities = 64/136 (47%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Frame = +3
Query: 90 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 269
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 270 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 434
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 435 AIVVEKPHVKWSDVAG 482
AIV+E+P+VKWSDVAG
Sbjct: 123 AIVIERPNVKWSDVAG 138
>AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing 1
protein.
Length = 444
Score = 120 bits (289), Expect = 3e-27
Identities = 64/136 (47%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Frame = +3
Query: 90 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 269
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 270 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 434
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 435 AIVVEKPHVKWSDVAG 482
AIV+E+P+VKWSDVAG
Sbjct: 123 AIVIERPNVKWSDVAG 138
>AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sorting
factor 4B protein.
Length = 444
Score = 120 bits (289), Expect = 3e-27
Identities = 64/136 (47%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Frame = +3
Query: 90 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 269
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 270 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 434
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 435 AIVVEKPHVKWSDVAG 482
AIV+E+P+VKWSDVAG
Sbjct: 123 AIVIERPNVKWSDVAG 138
>AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein.
Length = 444
Score = 120 bits (289), Expect = 3e-27
Identities = 64/136 (47%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Frame = +3
Query: 90 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 269
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 270 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 434
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 435 AIVVEKPHVKWSDVAG 482
AIV+E+P+VKWSDVAG
Sbjct: 123 AIVIERPNVKWSDVAG 138
>BC009692-1|AAH09692.1| 81|Homo sapiens VPS4B protein protein.
Length = 81
Score = 105 bits (253), Expect = 7e-23
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +3
Query: 90 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 269
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 270 LQYLDRA 290
+YLDRA
Sbjct: 63 TEYLDRA 69
>BC004540-1|AAH04540.1| 541|Homo sapiens RPS6KL1 protein protein.
Length = 541
Score = 41.9 bits (94), Expect = 0.001
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 87 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 266
MT + L A + A E D +++YE A Y++GV+ L + + ER +E+++ K
Sbjct: 44 MTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102
Query: 267 CLQYLDRA 290
+YL RA
Sbjct: 103 ITKYLRRA 110
>AC006530-3|AAD30182.1| 549|Homo sapiens unknown protein.
Length = 549
Score = 41.9 bits (94), Expect = 0.001
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 87 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 266
MT + L A + A E D +++YE A Y++GV+ L + + ER +E+++ K
Sbjct: 44 MTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102
Query: 267 CLQYLDRA 290
+YL RA
Sbjct: 103 ITKYLRRA 110
>BC056202-1|AAH56202.1| 813|Homo sapiens calpain 7 protein.
Length = 813
Score = 39.9 bits (89), Expect = 0.005
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +3
Query: 105 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 284
L++A LVT+A +ED+ +N E+A+ LY V+ L YE + + ++ Q LD
Sbjct: 87 LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145
Query: 285 RA 290
RA
Sbjct: 146 RA 147
>AB028639-1|BAA78730.1| 813|Homo sapiens PalBH protein.
Length = 813
Score = 39.9 bits (89), Expect = 0.005
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +3
Query: 105 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 284
L++A LVT+A +ED+ +N E+A+ LY V+ L YE + + ++ Q LD
Sbjct: 87 LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145
Query: 285 RA 290
RA
Sbjct: 146 RA 147
>BC104769-1|AAI04770.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.009
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 105 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 284
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 285 RA 290
RA
Sbjct: 299 RA 300
>AL645860-2|CAH70704.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.1 bits (87), Expect = 0.009
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 105 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 284
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286
Query: 285 RA 290
RA
Sbjct: 287 RA 288
>AL645860-1|CAH70703.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.009
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 105 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 284
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 285 RA 290
RA
Sbjct: 299 RA 300
>AL583826-2|CAH73805.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.1 bits (87), Expect = 0.009
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 105 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 284
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286
Query: 285 RA 290
RA
Sbjct: 287 RA 288
>AL583826-1|CAH73804.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.009
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 105 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 284
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 285 RA 290
RA
Sbjct: 299 RA 300
>AL512449-2|CAH72000.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.1 bits (87), Expect = 0.009
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 105 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 284
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286
Query: 285 RA 290
RA
Sbjct: 287 RA 288
>AL512449-1|CAH71999.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.009
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 105 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 284
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 285 RA 290
RA
Sbjct: 299 RA 300
>AK054800-1|BAB70808.1| 255|Homo sapiens protein ( Homo sapiens
cDNA FLJ30238 fis, clone BRACE2002050. ).
Length = 255
Score = 39.1 bits (87), Expect = 0.009
Identities = 21/68 (30%), Positives = 36/68 (52%)
Frame = +3
Query: 87 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 266
MT + L A + A E +++YE A Y++GV+ L + + ER +E+++ K
Sbjct: 44 MTKRDYLVDAATQIRLALERGVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102
Query: 267 CLQYLDRA 290
+YL RA
Sbjct: 103 ITKYLRRA 110
>AF477978-1|AAL84818.1| 1066|Homo sapiens RSK-like protein protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.009
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +3
Query: 105 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 284
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 285 RA 290
RA
Sbjct: 299 RA 300
>AB070706-1|BAB63956.1| 1066|Homo sapiens RSK-like protein protein.
Length = 1066
Score = 37.5 bits (83), Expect = 0.028
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +3
Query: 105 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 284
L+KA +L+ ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLVLKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 285 RA 290
RA
Sbjct: 299 RA 300
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,169,982
Number of Sequences: 237096
Number of extensions: 739502
Number of successful extensions: 1561
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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