Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326B09f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 0.36
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 25 0.36
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 1.9
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 1.9
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 1.9
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.5
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.5
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 3.3
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 3.3
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 7.7
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 25.4 bits (53), Expect = 0.36
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 349 LLAVQVASDV-LEGIG-PFESVEYSVKVPTERARE 251
+LAV +D+ L+ G P E+V Y+V VPT+ E
Sbjct: 81 ILAVNAEADITLKNAGTPPEAVSYNVAVPTKSILE 115
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 232 ES*TQTLPAPSQWEL*QNIQRFRKDQ 309
+S T+T P+ +Q +NI+RF K +
Sbjct: 533 KSSTETPPSYNQLNYNENIERFFKSK 558
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 25.4 bits (53), Expect = 0.36
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 349 LLAVQVASDV-LEGIG-PFESVEYSVKVPTERARE 251
+LAV +D+ L+ G P E+V Y+V VPT+ E
Sbjct: 81 ILAVNAEADITLKNAGTPPEAVSYNVAVPTKSILE 115
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.0 bits (47), Expect = 1.9
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = -2
Query: 364 YMASLLLAVQVASDVLEGIGPFESVEY----SVKVPTERAREGFVFRTRHRAPGGAATQS 197
Y+ LLA + + G+GP + ++Y S+ P R G F R P QS
Sbjct: 278 YLHQQLLARYELNRLSNGLGPIKDIDYENVQSLYQPHLRGLNGLEFAGR---PQNLQLQS 334
Query: 196 SRPAPIQ 176
R IQ
Sbjct: 335 QRNQLIQ 341
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 1.9
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 454 VITRSLGSQRAVGS--LVAAAHLPVHHYIRMTYMASLLLAVQVASDVLEGI 308
+I S G GS L+ + L Y + S L +Q+A DVLEGI
Sbjct: 660 IIDHSYGGGFGFGSAVLLISDRLSRDLYCGIRAGLSWLERIQIALDVLEGI 710
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 1.9
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 454 VITRSLGSQRAVGS--LVAAAHLPVHHYIRMTYMASLLLAVQVASDVLEGI 308
+I S G GS L+ + L Y + S L +Q+A DVLEGI
Sbjct: 698 IIDHSYGGGFGFGSAVLLISDRLSRDLYCGIRAGLSWLERIQIALDVLEGI 748
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 2.5
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 374 DVVVNRKMSSSYERADCALAAQAP-CDDEDFY 466
D +NR++ +Y CAL + CD D Y
Sbjct: 204 DPAINRRLKETYSNM-CALCEKPEVCDYPDIY 234
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 2.5
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 374 DVVVNRKMSSSYERADCALAAQAP-CDDEDFY 466
D +NR++ +Y CAL + CD D Y
Sbjct: 204 DPAINRRLKETYSNM-CALCEKPEVCDYPDIY 234
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 2.5
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 374 DVVVNRKMSSSYERADCALAAQAP-CDDEDFY 466
D +NR++ +Y CAL + CD D Y
Sbjct: 204 DPAINRRLKETYSNM-CALCEKPEVCDYPDIY 234
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 339 SKLLRTYSKALVLSKALN 286
+K+LRT KA+VLS L+
Sbjct: 1318 NKILRTCQKAVVLSMLLD 1335
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +3
Query: 429 WLPRLLVMTKTSTEKRSCTRRR 494
W P+++ + T + S TRR+
Sbjct: 1154 WTPKMMAVEPTDKQANSKTRRQ 1175
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +3
Query: 429 WLPRLLVMTKT 461
W+PRLL+M +T
Sbjct: 357 WMPRLLMMRRT 367
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 306 PMPSSTSEATWT 341
P+P S S+ TWT
Sbjct: 62 PLPYSGSKCTWT 73
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,719
Number of Sequences: 438
Number of extensions: 3370
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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