Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326B06f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100660-3|AAC68972.1|  179|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF100660-2|AAC68971.1|  393|Caenorhabditis elegans Hypothetical ...    29   2.7  
U42848-5|AAN84855.1|  283|Caenorhabditis elegans Hypothetical pr...    28   3.5  
U42848-4|AAA83610.2|  302|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z70684-11|CAA94604.1| 1141|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z70682-10|CAA94588.1| 1141|Caenorhabditis elegans Hypothetical p...    28   4.7  
AB073210-1|BAB70473.1| 1141|Caenorhabditis elegans rac effector ...    28   4.7  
U39999-8|AAY44011.1|  146|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U13645-3|AAM15542.1|   86|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U13645-2|AAM15543.1|  367|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U13645-1|AAA20987.2|  470|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF016674-3|AAB66128.1|  558|Caenorhabditis elegans Hypothetical ...    27   8.1  

>AF100660-3|AAC68972.1|  179|Caenorhabditis elegans Hypothetical
           protein H35B03.2b protein.
          Length = 179

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -3

Query: 375 IFAKGAGHSLDIQAQLGYETIGLDWTVDPTEARKIVG---ENITLQ 247
           IF+ GA   LD+++ +    + L W V   EARK++    +N+ LQ
Sbjct: 44  IFSSGAETMLDLRSPVDVMNMSLLWGVANNEARKMISGFPKNLLLQ 89


>AF100660-2|AAC68971.1|  393|Caenorhabditis elegans Hypothetical
           protein H35B03.2a protein.
          Length = 393

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -3

Query: 375 IFAKGAGHSLDIQAQLGYETIGLDWTVDPTEARKIVG---ENITLQ 247
           IF+ GA   LD+++ +    + L W V   EARK++    +N+ LQ
Sbjct: 258 IFSSGAETMLDLRSPVDVMNMSLLWGVANNEARKMISGFPKNLLLQ 303


>U42848-5|AAN84855.1|  283|Caenorhabditis elegans Hypothetical
           protein C31H1.6b protein.
          Length = 283

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 56  KYSFYIASCTVSVKTVILSSGVC 124
           +YSF    CT S  TVI+  GVC
Sbjct: 106 EYSFKTERCTRSSSTVIIEKGVC 128


>U42848-4|AAA83610.2|  302|Caenorhabditis elegans Hypothetical
           protein C31H1.6a protein.
          Length = 302

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 56  KYSFYIASCTVSVKTVILSSGVC 124
           +YSF    CT S  TVI+  GVC
Sbjct: 125 EYSFKTERCTRSSSTVIIEKGVC 147


>Z70684-11|CAA94604.1| 1141|Caenorhabditis elegans Hypothetical
           protein F28D1.10 protein.
          Length = 1141

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 213 PEEIKTLTTEMVKKFGKHRYIANLGHGITPQTPL-ESM-TVFTETVH 79
           P++++T   E+    G HR I    H   P+T L +S+ T F E +H
Sbjct: 676 PDKLQTTLLEISAALGAHRQIYVADHTFAPRTYLAQSLETKFVELLH 722


>Z70682-10|CAA94588.1| 1141|Caenorhabditis elegans Hypothetical
           protein F28D1.10 protein.
          Length = 1141

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 213 PEEIKTLTTEMVKKFGKHRYIANLGHGITPQTPL-ESM-TVFTETVH 79
           P++++T   E+    G HR I    H   P+T L +S+ T F E +H
Sbjct: 676 PDKLQTTLLEISAALGAHRQIYVADHTFAPRTYLAQSLETKFVELLH 722


>AB073210-1|BAB70473.1| 1141|Caenorhabditis elegans rac effector
           protein.
          Length = 1141

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 213 PEEIKTLTTEMVKKFGKHRYIANLGHGITPQTPL-ESM-TVFTETVH 79
           P++++T   E+    G HR I    H   P+T L +S+ T F E +H
Sbjct: 676 PDKLQTTLLEISAALGAHRQIYVADHTFAPRTYLAQSLETKFVELLH 722


>U39999-8|AAY44011.1|  146|Caenorhabditis elegans Hypothetical
           protein F41G3.19 protein.
          Length = 146

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 74  ASCTVSVKTVILSSGVCGVIPCPKLAMY 157
           A CTVS   V L++   GV  CPK+A Y
Sbjct: 39  ALCTVSWGCVDLTNPSNGVSDCPKMASY 66


>U13645-3|AAM15542.1|   86|Caenorhabditis elegans Hypothetical
           protein C05D10.2b protein.
          Length = 86

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/68 (26%), Positives = 29/68 (42%)
 Frame = -3

Query: 345 DIQAQLGYETIGLDWTVDPTEARKIVGENITLQGNLDPQDLYKTPEEIKTLTTEMVKKFG 166
           D+Q +LG    G+ W      +R+ V          +P D  +T  E+  L     ++FG
Sbjct: 14  DLQKRLGKGAYGIVWKAYDKRSRETVALKKIFDAFRNPTDSQRTFREVMFL-----QEFG 68

Query: 165 KHRYIANL 142
           KH  +  L
Sbjct: 69  KHPNVIKL 76


>U13645-2|AAM15543.1|  367|Caenorhabditis elegans Hypothetical
           protein C05D10.2c protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/68 (26%), Positives = 29/68 (42%)
 Frame = -3

Query: 345 DIQAQLGYETIGLDWTVDPTEARKIVGENITLQGNLDPQDLYKTPEEIKTLTTEMVKKFG 166
           D+Q +LG    G+ W      +R+ V          +P D  +T  E+  L     ++FG
Sbjct: 14  DLQKRLGKGAYGIVWKAYDKRSRETVALKKIFDAFRNPTDSQRTFREVMFL-----QEFG 68

Query: 165 KHRYIANL 142
           KH  +  L
Sbjct: 69  KHPNVIKL 76


>U13645-1|AAA20987.2|  470|Caenorhabditis elegans Hypothetical
           protein C05D10.2a protein.
          Length = 470

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/68 (26%), Positives = 29/68 (42%)
 Frame = -3

Query: 345 DIQAQLGYETIGLDWTVDPTEARKIVGENITLQGNLDPQDLYKTPEEIKTLTTEMVKKFG 166
           D+Q +LG    G+ W      +R+ V          +P D  +T  E+  L     ++FG
Sbjct: 14  DLQKRLGKGAYGIVWKAYDKRSRETVALKKIFDAFRNPTDSQRTFREVMFL-----QEFG 68

Query: 165 KHRYIANL 142
           KH  +  L
Sbjct: 69  KHPNVIKL 76


>AF016674-3|AAB66128.1|  558|Caenorhabditis elegans Hypothetical
           protein C03H5.5 protein.
          Length = 558

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 25/87 (28%), Positives = 37/87 (42%)
 Frame = -3

Query: 420 RAKLTEKSLEQVPMTIFAKGAGHSLDIQAQLGYETIGLDWTVDPTEARKIVGENITLQGN 241
           R K   K  E+    +  K  G SL+I      E IGL  T +P  +R+ + +N     N
Sbjct: 23  REKELRKEAERQLKVLLDKQTG-SLEITKP---ENIGLFITPEPQTSRRPIKDNSAKPAN 78

Query: 240 LDPQDLYKTPEEIKTLTTEMVKKFGKH 160
                   TP E  T  T++V ++  H
Sbjct: 79  SKTMSELPTPNE-DTKATDIVLEYLAH 104


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,744,267
Number of Sequences: 27780
Number of extensions: 231836
Number of successful extensions: 610
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)