Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326A12f
         (462 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical pr...    36   0.019
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr...    29   1.2  
AC024799-8|AAW88387.1|  297|Caenorhabditis elegans Hypothetical ...    29   1.2  
AL021503-9|CAA16417.2|  572|Caenorhabditis elegans Hypothetical ...    27   6.5  
Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical
           protein F43G9.1 protein.
          Length = 358

 Score = 35.5 bits (78), Expect = 0.019
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -3

Query: 436 ARGRALTGDLGGTAKCSEFTNAIISKL 356
           A GRA TGDLGGT  CS FT  + +++
Sbjct: 328 ADGRAKTGDLGGTGTCSSFTADVCARV 354


>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
            F52B5.3 protein.
          Length = 1425

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 123  SNHHHSYLYHCQHYNSELP 67
            +NHH+S+ Y   HYN +LP
Sbjct: 1324 NNHHYSHNYSYPHYNIQLP 1342


>AC024799-8|AAW88387.1|  297|Caenorhabditis elegans Hypothetical
           protein Y49C4A.2 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -2

Query: 224 RIIIEFKLLYSIA*AIVVFML*KRSLICK*ISNN 123
           ++ IEF  L  +A AIVV +L   +LICK + NN
Sbjct: 2   KVFIEFACLIGLACAIVVIIL-NLNLICKFVLNN 34


>AL021503-9|CAA16417.2|  572|Caenorhabditis elegans Hypothetical
           protein Y68A4A.5 protein.
          Length = 572

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 244 VTHLKHQNATFDVTFHSLNKYFFHEYSNTGTAPIQPNS 357
           ++ L H   +   T HSLN+  FHE  ++     +PNS
Sbjct: 251 ISFLHHSFWSLFYTIHSLNEKLFHEDVHSVVDKHEPNS 288


>Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical
           protein B0285.1 protein.
          Length = 730

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 123 SNHHHSYLYHCQHYNSELP 67
           SNHHH + +H  H+ S LP
Sbjct: 675 SNHHHHH-HHSHHHASSLP 692


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,654,963
Number of Sequences: 27780
Number of extensions: 183177
Number of successful extensions: 401
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)