Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS326A09f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U08023-1|AAB60430.1|  999|Homo sapiens c-mer protein.                  30   5.7  
BC114918-1|AAI14919.1|  823|Homo sapiens MERTK protein protein.        30   5.7  
BC114917-1|AAI14918.1|  823|Homo sapiens MERTK protein protein.        30   5.7  
AF260529-1|AAG33129.1|  978|Homo sapiens MER receptor tyrosine k...    30   5.7  
AC104651-1|AAX93144.1|  432|Homo sapiens unknown protein.              30   5.7  
AB067348-1|BAC02383.1|  131|Homo sapiens immunoglobulin heavy ch...    29   9.9  

>U08023-1|AAB60430.1|  999|Homo sapiens c-mer protein.
          Length = 999

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 94  YKLEQALNLWGESSMGVSCPERQGCSAERIWYAACTTLGIP 216
           Y+++Q L      S+GVSC    G SA   W  A TT G P
Sbjct: 344 YQIKQ-LQALANYSIGVSCMNEIGWSAVSPWILASTTEGAP 383


>BC114918-1|AAI14919.1|  823|Homo sapiens MERTK protein protein.
          Length = 823

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 94  YKLEQALNLWGESSMGVSCPERQGCSAERIWYAACTTLGIP 216
           Y+++Q L      S+GVSC    G SA   W  A TT G P
Sbjct: 168 YQIKQ-LQALANYSIGVSCMNEIGWSAVSPWILASTTEGAP 207


>BC114917-1|AAI14918.1|  823|Homo sapiens MERTK protein protein.
          Length = 823

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 94  YKLEQALNLWGESSMGVSCPERQGCSAERIWYAACTTLGIP 216
           Y+++Q L      S+GVSC    G SA   W  A TT G P
Sbjct: 168 YQIKQ-LQALANYSIGVSCMNEIGWSAVSPWILASTTEGAP 207


>AF260529-1|AAG33129.1|  978|Homo sapiens MER receptor tyrosine
           kinase protein.
          Length = 978

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 94  YKLEQALNLWGESSMGVSCPERQGCSAERIWYAACTTLGIP 216
           Y+++Q L      S+GVSC    G SA   W  A TT G P
Sbjct: 323 YQIKQ-LQALANYSIGVSCMNEIGWSAVSPWILASTTEGAP 362


>AC104651-1|AAX93144.1|  432|Homo sapiens unknown protein.
          Length = 432

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 94  YKLEQALNLWGESSMGVSCPERQGCSAERIWYAACTTLGIP 216
           Y+++Q L      S+GVSC    G SA   W  A TT G P
Sbjct: 344 YQIKQ-LQALANYSIGVSCMNEIGWSAVSPWILASTTEGAP 383


>AB067348-1|BAC02383.1|  131|Homo sapiens immunoglobulin heavy chain
           VHDJ region protein.
          Length = 131

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +1

Query: 1   NIKKTTITAQQNRAAVVYCCDVGAAVSGQVSYKLEQALNLWGESS 135
           ++K  ++T +   AAV YC  V    S    Y L+  +++WG+ +
Sbjct: 83  SLKLNSVTPED--AAVYYCARVRGYCSSSSCYGLDYGMDVWGQGT 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,709,313
Number of Sequences: 237096
Number of extensions: 1277511
Number of successful extensions: 3261
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3261
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)