BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS326A09f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052057-1|AAK93481.1| 452|Drosophila melanogaster LP08566p pro... 34 0.13
AE014298-2402|AAF48607.1| 395|Drosophila melanogaster CG4394-PB... 34 0.13
AE014298-2401|AAF48608.2| 452|Drosophila melanogaster CG4394-PC... 34 0.13
AE014298-2400|AAN09408.1| 474|Drosophila melanogaster CG4394-PA... 34 0.13
AY061127-1|AAL28675.1| 509|Drosophila melanogaster LD11031p pro... 28 8.8
AE013599-3956|AAF47272.2| 509|Drosophila melanogaster CG3589-PA... 28 8.8
>AY052057-1|AAK93481.1| 452|Drosophila melanogaster LP08566p
protein.
Length = 452
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 28 QQNRAAVVYCCDVGAAVSGQVSYKLEQALNLWGESSMGVSCPERQ 162
+QN+ V YCCD+ ++ QV +L++A L + S V+ + Q
Sbjct: 161 EQNQLDVQYCCDITQSLKEQVESRLDEAQKLVNQLSADVTYHQNQ 205
>AE014298-2402|AAF48607.1| 395|Drosophila melanogaster CG4394-PB,
isoform B protein.
Length = 395
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 28 QQNRAAVVYCCDVGAAVSGQVSYKLEQALNLWGESSMGVSCPERQ 162
+QN+ V YCCD+ ++ QV +L++A L + S V+ + Q
Sbjct: 104 EQNQLDVQYCCDITQSLKEQVESRLDEAQKLVNQLSADVTYHQNQ 148
>AE014298-2401|AAF48608.2| 452|Drosophila melanogaster CG4394-PC,
isoform C protein.
Length = 452
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 28 QQNRAAVVYCCDVGAAVSGQVSYKLEQALNLWGESSMGVSCPERQ 162
+QN+ V YCCD+ ++ QV +L++A L + S V+ + Q
Sbjct: 161 EQNQLDVQYCCDITQSLKEQVESRLDEAQKLVNQLSADVTYHQNQ 205
>AE014298-2400|AAN09408.1| 474|Drosophila melanogaster CG4394-PA,
isoform A protein.
Length = 474
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 28 QQNRAAVVYCCDVGAAVSGQVSYKLEQALNLWGESSMGVSCPERQ 162
+QN+ V YCCD+ ++ QV +L++A L + S V+ + Q
Sbjct: 183 EQNQLDVQYCCDITQSLKEQVESRLDEAQKLVNQLSADVTYHQNQ 227
>AY061127-1|AAL28675.1| 509|Drosophila melanogaster LD11031p
protein.
Length = 509
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 348 DVIDALCDQVLPXXRXIGNAVY*-GMPYGIRX*SXYDFLPWVVRFRYSKCGT 196
DV + C ++ +G VY G PY + +DF P + + R KC T
Sbjct: 366 DVPEQCCVRLARSPATVGQMVYNAGFPYYVNFSFRHDFNPSIFQGRVIKCDT 417
>AE013599-3956|AAF47272.2| 509|Drosophila melanogaster CG3589-PA
protein.
Length = 509
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 348 DVIDALCDQVLPXXRXIGNAVY*-GMPYGIRX*SXYDFLPWVVRFRYSKCGT 196
DV + C ++ +G VY G PY + +DF P + + R KC T
Sbjct: 366 DVPEQCCVRLARSPATVGQMVYNAGFPYYVNFSFRHDFNPSIFQGRVIKCDT 417
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,786,992
Number of Sequences: 53049
Number of extensions: 395576
Number of successful extensions: 865
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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